Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXS1O43638 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXS1O43638 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXS1O43638 AC116667.1-201ENST00000604855 2072 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXS1O43638 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXS1O43638 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXS1O43638 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXS1O43638 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXS1O43638 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXS1O43638 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXS1O43638 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXS1O43638 RNU6-490P-201ENST00000362985 107 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 RNU6-379P-201ENST00000363813 104 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 RNA5SP175-201ENST00000364275 119 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 RNVU1-3-201ENST00000364313 161 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 RNA5SP366-201ENST00000365454 123 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 DEFB109C-201ENST00000382575 264 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 DEFB109B-201ENST00000382656 264 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 Y_RNA.645-201ENST00000391229 102 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AL445189.1-201ENST00000405722 338 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AL583834.1-201ENST00000406943 343 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 RN7SKP159-201ENST00000410657 292 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXS1O43638 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXS1O43638 TPT1P12-201ENST00000448968 492 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 RPL10P17-201ENST00000453852 316 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXS1O43638 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.1□□□□□ -1.75
FOXS1O43638 AC010618.1-201ENST00000469924 477 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
FOXS1O43638 AC091167.1-201ENST00000492017 396 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXS1O43638 AC116655.1-201ENST00000508324 901 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AC026801.2-201ENST00000515352 425 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 RNU6-470P-201ENST00000515954 104 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 SNORA14.1-201ENST00000516113 141 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 RNU6-1069P-201ENST00000516612 133 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 RNU6-699P-201ENST00000517081 110 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AP005902.1-201ENST00000521358 186 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXS1O43638 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXS1O43638 DYNLL1P4-201ENST00000549314 266 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 SETP7-201ENST00000552169 453 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 MIR3939-201ENST00000582614 106 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXS1O43638 AL590392.1-201ENST00000604960 446 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AC018462.2-201ENST00000605375 395 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXS1O43638 AC009570.1-201ENST00000609599 745 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 U2.17-201ENST00000611454 95 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AC004696.1-201ENST00000614345 607 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 AL445567.2-201ENST00000618935 498 ntBASIC4.1□□□□□ -1.75
FOXS1O43638 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXS1O43638 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXS1O43638 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXS1O43638 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXS1O43638 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXS1O43638 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXS1O43638 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXS1O43638 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXS1O43638 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.75
FOXS1O43638 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXS1O43638 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXS1O43638 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
FOXS1O43638 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
FOXS1O43638 XIAPP3-201ENST00000312918 795 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 RNU1-115P-201ENST00000365329 160 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 SNORA16.2-201ENST00000390991 127 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 SNORD70.1-201ENST00000391007 85 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 NDUFS5P1-201ENST00000405668 289 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 Y_RNA.594-201ENST00000410373 140 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 MIR1911-201ENST00000410783 80 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 RPL23AP26-201ENST00000412728 464 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 AC080125.1-201ENST00000414888 684 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 RPLP0P7-201ENST00000416050 667 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXS1O43638 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXS1O43638 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.09□□□□□ -1.75
FOXS1O43638 AL157831.1-201ENST00000426134 473 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 RSL24D1P6-201ENST00000426934 401 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXS1O43638 RPL23AP69-201ENST00000431134 458 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 AL132765.1-201ENST00000434165 553 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 CEACAMP1-201ENST00000434624 1035 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXS1O43638 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXS1O43638 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXS1O43638 RN7SL385P-201ENST00000468873 276 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 RN7SL432P-201ENST00000484057 298 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 AC008958.1-201ENST00000511047 682 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 AC021146.3-201ENST00000511911 260 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 Y_RNA.668-201ENST00000516233 93 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 Y_RNA.670-201ENST00000516255 105 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 RNU1-54P-201ENST00000517181 120 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXS1O43638 CYCSP29-201ENST00000533731 318 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 GNAI2P1-201ENST00000541815 315 ntBASIC4.09□□□□□ -1.75
FOXS1O43638 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms