Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM1O15116 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM1O15116 MIR4658-201ENST00000584344 65 ntBASIC2.5□□□□□ -2.01
LSM1O15116 AC068620.3-201ENST00000602749 560 ntBASIC2.5□□□□□ -2.01
LSM1O15116 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.5□□□□□ -2.01
LSM1O15116 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LSM1O15116 MTCO1P9-201ENST00000505577 1534 ntBASIC2.5□□□□□ -2.01
LSM1O15116 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM1O15116 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LSM1O15116 RNU6-1122P-201ENST00000384449 107 ntBASIC2.49□□□□□ -2.01
LSM1O15116 RNU6-1072P-201ENST00000384703 107 ntBASIC2.49□□□□□ -2.01
LSM1O15116 RNU6-443P-201ENST00000384780 107 ntBASIC2.49□□□□□ -2.01
LSM1O15116 USP9YP20-201ENST00000419224 558 ntBASIC2.49□□□□□ -2.01
LSM1O15116 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
LSM1O15116 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM1O15116 RPS24P13-201ENST00000442520 397 ntBASIC2.49□□□□□ -2.01
LSM1O15116 BX322784.1-201ENST00000455793 1077 ntBASIC2.49□□□□□ -2.01
LSM1O15116 AC097493.1-201ENST00000463958 372 ntBASIC2.49□□□□□ -2.01
LSM1O15116 RPL30P9-201ENST00000465586 330 ntBASIC2.49□□□□□ -2.01
LSM1O15116 AC011825.1-201ENST00000484967 388 ntBASIC2.49□□□□□ -2.01
LSM1O15116 AC138853.1-201ENST00000503549 823 ntBASIC2.49□□□□□ -2.01
LSM1O15116 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM1O15116 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM1O15116 XKRY-201ENST00000510392 1100 ntBASIC2.49□□□□□ -2.01
LSM1O15116 COX6CP8-201ENST00000522620 226 ntBASIC2.49□□□□□ -2.01
LSM1O15116 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM1O15116 MIR5092-201ENST00000583139 88 ntBASIC2.49□□□□□ -2.01
LSM1O15116 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.49□□□□□ -2.01
LSM1O15116 AL158163.2-201ENST00000619110 700 ntBASIC2.49□□□□□ -2.01
LSM1O15116 AC104985.3-201ENST00000623479 597 ntBASIC2.49□□□□□ -2.01
LSM1O15116 AL159972.1-201ENST00000625150 448 ntBASIC2.49□□□□□ -2.01
LSM1O15116 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.49□□□□□ -2.01
LSM1O15116 MTND1P37-201ENST00000636562 264 ntBASIC2.49□□□□□ -2.01
LSM1O15116 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.49□□□□□ -2.01
LSM1O15116 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.49□□□□□ -2.01
LSM1O15116 AL079343.1-201ENST00000572358 1771 ntBASIC2.49□□□□□ -2.01
LSM1O15116 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LSM1O15116 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LSM1O15116 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LSM1O15116 RN7SKP226-201ENST00000364912 300 ntBASIC2.48□□□□□ -2.01
LSM1O15116 MIR524-201ENST00000385242 87 ntBASIC2.48□□□□□ -2.01
LSM1O15116 RNU2-33P-201ENST00000410344 192 ntBASIC2.48□□□□□ -2.01
LSM1O15116 RPLP0P7-201ENST00000416050 667 ntBASIC2.48□□□□□ -2.01
LSM1O15116 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.48□□□□□ -2.01
LSM1O15116 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.48□□□□□ -2.01
LSM1O15116 DDX3P2-201ENST00000446138 111 ntBASIC2.48□□□□□ -2.01
LSM1O15116 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.48□□□□□ -2.01
LSM1O15116 DPPA3P1-201ENST00000448050 469 ntBASIC2.48□□□□□ -2.01
LSM1O15116 AC233279.1-201ENST00000455300 423 ntBASIC2.48□□□□□ -2.01
LSM1O15116 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.48□□□□□ -2.01
LSM1O15116 snoU13.8-201ENST00000458890 104 ntBASIC2.48□□□□□ -2.01
LSM1O15116 RPS20P22-201ENST00000473700 357 ntBASIC2.48□□□□□ -2.01
LSM1O15116 EIF4EP3-201ENST00000498782 656 ntBASIC2.48□□□□□ -2.01
LSM1O15116 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.48□□□□□ -2.01
LSM1O15116 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.48□□□□□ -2.01
LSM1O15116 AC005832.3-201ENST00000537929 631 ntBASIC2.48□□□□□ -2.01
LSM1O15116 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LSM1O15116 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.48□□□□□ -2.01
LSM1O15116 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.48□□□□□ -2.01
LSM1O15116 RPL21P136-201ENST00000605378 396 ntBASIC2.48□□□□□ -2.01
LSM1O15116 MIR6840-201ENST00000611937 71 ntBASIC2.48□□□□□ -2.01
LSM1O15116 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.48□□□□□ -2.01
LSM1O15116 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LSM1O15116 AL137003.2-201ENST00000606924 2538 ntBASIC2.48□□□□□ -2.01
LSM1O15116 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
LSM1O15116 AC004944.1-201ENST00000517807 3059 ntBASIC2.47□□□□□ -2.01
LSM1O15116 Y_RNA.578-201ENST00000390903 88 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AL360182.1-201ENST00000397433 468 ntBASIC2.47□□□□□ -2.01
LSM1O15116 BX119904.4-201ENST00000424402 301 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.47□□□□□ -2.01
LSM1O15116 IPO7P1-201ENST00000442031 636 ntBASIC2.47□□□□□ -2.01
LSM1O15116 RNU7-26P-201ENST00000458980 63 ntBASIC2.47□□□□□ -2.01
LSM1O15116 RPS20P20-201ENST00000460498 340 ntBASIC2.47□□□□□ -2.01
LSM1O15116 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LSM1O15116 AC069528.1-202ENST00000482888 637 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AC080014.1-201ENST00000496877 1201 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.47□□□□□ -2.01
LSM1O15116 AC114786.4-201ENST00000508771 728 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.47□□□□□ -2.01
LSM1O15116 AC114797.1-201ENST00000514003 728 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AC022634.1-201ENST00000520765 532 ntBASIC2.47□□□□□ -2.01
LSM1O15116 CKS1BP7-201ENST00000522230 235 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.47□□□□□ -2.01
LSM1O15116 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.47□□□□□ -2.01
LSM1O15116 AC243972.3-201ENST00000539655 198 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.47□□□□□ -2.01
LSM1O15116 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.47□□□□□ -2.01
LSM1O15116 AC087465.1-201ENST00000560574 245 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.47□□□□□ -2.01
LSM1O15116 HMGN2P15-201ENST00000585707 270 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AL355877.2-201ENST00000603670 358 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AC136601.2-201ENST00000604356 474 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.47□□□□□ -2.01
LSM1O15116 AC123767.1-202ENST00000620407 817 ntBASIC2.47□□□□□ -2.01
LSM1O15116 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.47□□□□□ -2.01
LSM1O15116 OR1S1-201ENST00000624470 978 ntBASIC2.47□□□□□ -2.01
LSM1O15116 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.47□□□□□ -2.01
LSM1O15116 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.46□□□□□ -2.02
LSM1O15116 MIR208A-201ENST00000362287 71 ntBASIC2.46□□□□□ -2.02
LSM1O15116 RNU6-224P-201ENST00000384055 107 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms