Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CUX2O14529 RNU6-492P-201ENST00000363035 104 ntBASIC3.48□□□□□ -1.85
CUX2O14529 RNU6-263P-201ENST00000363811 107 ntBASIC3.48□□□□□ -1.85
CUX2O14529 RNU6-1181P-201ENST00000384191 106 ntBASIC3.48□□□□□ -1.85
CUX2O14529 RNU6-921P-201ENST00000384361 107 ntBASIC3.48□□□□□ -1.85
CUX2O14529 RNU2-37P-201ENST00000410695 177 ntBASIC3.48□□□□□ -1.85
CUX2O14529 MTCYBP32-201ENST00000427945 1084 ntBASIC3.48□□□□□ -1.85
CUX2O14529 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.48□□□□□ -1.85
CUX2O14529 ARF4P4-201ENST00000439608 520 ntBASIC3.48□□□□□ -1.85
CUX2O14529 AC104564.1-201ENST00000493028 407 ntBASIC3.48□□□□□ -1.85
CUX2O14529 AC078918.1-201ENST00000498515 228 ntBASIC3.48□□□□□ -1.85
CUX2O14529 MTCO3P44-201ENST00000510977 541 ntBASIC3.48□□□□□ -1.85
CUX2O14529 AC112198.4-201ENST00000515450 351 ntBASIC3.48□□□□□ -1.85
CUX2O14529 RNA5SP102-201ENST00000516865 106 ntBASIC3.48□□□□□ -1.85
CUX2O14529 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.48□□□□□ -1.85
CUX2O14529 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.48□□□□□ -1.85
CUX2O14529 AC126365.2-201ENST00000580630 379 ntBASIC3.48□□□□□ -1.85
CUX2O14529 MAGOH2P-202ENST00000584384 429 ntBASIC3.48□□□□□ -1.85
CUX2O14529 AC007687.1-201ENST00000602704 304 ntBASIC3.48□□□□□ -1.85
CUX2O14529 AC099785.1-201ENST00000605697 437 ntBASIC3.48□□□□□ -1.85
CUX2O14529 uc_338.5-201ENST00000611839 155 ntBASIC3.48□□□□□ -1.85
CUX2O14529 KPNA2P1-201ENST00000458289 1591 ntBASIC3.48□□□□□ -1.85
CUX2O14529 AC103988.1-201ENST00000566382 2177 ntBASIC3.48□□□□□ -1.85
CUX2O14529 SNORA51.2-201ENST00000364595 132 ntBASIC3.47□□□□□ -1.85
CUX2O14529 Y_RNA.493-201ENST00000384422 102 ntBASIC3.47□□□□□ -1.85
CUX2O14529 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CUX2O14529 MTND4P13-201ENST00000402078 1023 ntBASIC3.47□□□□□ -1.85
CUX2O14529 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.47□□□□□ -1.85
CUX2O14529 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.47□□□□□ -1.85
CUX2O14529 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.47□□□□□ -1.85
CUX2O14529 AC104073.1-201ENST00000451988 151 ntBASIC3.47□□□□□ -1.85
CUX2O14529 RNU1-123P-201ENST00000458950 160 ntBASIC3.47□□□□□ -1.85
CUX2O14529 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CUX2O14529 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.47□□□□□ -1.85
CUX2O14529 AC023632.1-201ENST00000518463 375 ntBASIC3.47□□□□□ -1.85
CUX2O14529 AC104072.1-201ENST00000568817 668 ntBASIC3.47□□□□□ -1.85
CUX2O14529 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.47□□□□□ -1.85
CUX2O14529 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.47□□□□□ -1.85
CUX2O14529 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.47□□□□□ -1.85
CUX2O14529 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.47□□□□□ -1.85
CUX2O14529 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CUX2O14529 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CUX2O14529 AC010680.1-201ENST00000590024 3590 ntBASIC3.47□□□□□ -1.85
CUX2O14529 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CUX2O14529 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.47□□□□□ -1.85
CUX2O14529 AL391987.6-201ENST00000305671 199 ntBASIC3.47□□□□□ -1.85
CUX2O14529 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CUX2O14529 RNU6-600P-201ENST00000362524 99 ntBASIC3.47□□□□□ -1.85
CUX2O14529 RNU6-629P-201ENST00000384061 103 ntBASIC3.47□□□□□ -1.85
CUX2O14529 RNA5SP56-201ENST00000410277 118 ntBASIC3.47□□□□□ -1.85
CUX2O14529 FCF1P2-201ENST00000415284 583 ntBASIC3.47□□□□□ -1.85
CUX2O14529 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.47□□□□□ -1.85
CUX2O14529 RPL31P54-201ENST00000429803 370 ntBASIC3.47□□□□□ -1.85
CUX2O14529 AC003989.2-201ENST00000440224 169 ntBASIC3.47□□□□□ -1.85
CUX2O14529 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.47□□□□□ -1.85
CUX2O14529 SUMO2P5-201ENST00000506790 245 ntBASIC3.47□□□□□ -1.85
CUX2O14529 RNU6-885P-201ENST00000516607 104 ntBASIC3.47□□□□□ -1.85
CUX2O14529 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.47□□□□□ -1.85
CUX2O14529 OR4P1P-201ENST00000530808 1136 ntBASIC3.47□□□□□ -1.85
CUX2O14529 AC090502.2-201ENST00000549267 280 ntBASIC3.47□□□□□ -1.85
CUX2O14529 AC122134.1-202ENST00000569111 1201 ntBASIC3.47□□□□□ -1.85
CUX2O14529 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.47□□□□□ -1.85
CUX2O14529 AP000787.2-201ENST00000604432 568 ntBASIC3.47□□□□□ -1.85
CUX2O14529 AP005137.2-201ENST00000609238 400 ntBASIC3.47□□□□□ -1.85
CUX2O14529 RNU6-1192P-201ENST00000612197 107 ntBASIC3.47□□□□□ -1.85
CUX2O14529 AC090116.1-201ENST00000615679 446 ntBASIC3.47□□□□□ -1.85
CUX2O14529 RNU6-489P-201ENST00000618289 107 ntBASIC3.47□□□□□ -1.85
CUX2O14529 AP002371.2-201ENST00000624450 503 ntBASIC3.47□□□□□ -1.85
CUX2O14529 AC087821.2-201ENST00000637086 450 ntBASIC3.47□□□□□ -1.85
CUX2O14529 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CUX2O14529 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CUX2O14529 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CUX2O14529 AC006378.2-201ENST00000623178 2476 ntBASIC3.46□□□□□ -1.85
CUX2O14529 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.46□□□□□ -1.86
CUX2O14529 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.46□□□□□ -1.86
CUX2O14529 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CUX2O14529 AC130650.2-201ENST00000618736 2403 ntBASIC3.46□□□□□ -1.86
CUX2O14529 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.46□□□□□ -1.86
CUX2O14529 AL139098.1-201ENST00000407291 389 ntBASIC3.46□□□□□ -1.86
CUX2O14529 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.46□□□□□ -1.86
CUX2O14529 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.46□□□□□ -1.86
CUX2O14529 RPL21P66-201ENST00000426566 466 ntBASIC3.46□□□□□ -1.86
CUX2O14529 TRIAP1P1-201ENST00000427062 225 ntBASIC3.46□□□□□ -1.86
CUX2O14529 AC006548.1-201ENST00000427470 102 ntBASIC3.46□□□□□ -1.86
CUX2O14529 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.46□□□□□ -1.86
CUX2O14529 RPL21P2-201ENST00000440049 481 ntBASIC3.46□□□□□ -1.86
CUX2O14529 HMGB1P38-201ENST00000490557 577 ntBASIC3.46□□□□□ -1.86
CUX2O14529 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.46□□□□□ -1.86
CUX2O14529 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.46□□□□□ -1.86
CUX2O14529 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.46□□□□□ -1.86
CUX2O14529 AC109635.4-202ENST00000531666 412 ntBASIC3.46□□□□□ -1.86
CUX2O14529 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.46□□□□□ -1.86
CUX2O14529 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CUX2O14529 AL356575.1-201ENST00000603008 283 ntBASIC3.46□□□□□ -1.86
CUX2O14529 AC092954.1-201ENST00000609121 445 ntBASIC3.46□□□□□ -1.86
CUX2O14529 AC012531.5-201ENST00000611375 151 ntBASIC3.46□□□□□ -1.86
CUX2O14529 AC073968.1-201ENST00000618594 637 ntBASIC3.46□□□□□ -1.86
CUX2O14529 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.46□□□□□ -1.86
CUX2O14529 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.46□□□□□ -1.86
CUX2O14529 AC109454.4-201ENST00000623411 649 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms