Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TIMM9P1-201ENST00000436122 256 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM38O00635 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM38O00635 AL162389.1-201ENST00000449233 177 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 RPL36AP13-201ENST00000457490 317 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 MTCO2P29-201ENST00000465212 189 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM38O00635 AC135721.1-201ENST00000497954 479 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM38O00635 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM38O00635 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
TRIM38O00635 MIR2114-201ENST00000516645 80 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 RNU6-430P-201ENST00000517078 107 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM38O00635 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 ERHP1-201ENST00000523006 310 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 IGKV2D-19-201ENST00000523346 262 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 HPRT1P3-201ENST00000539521 576 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM38O00635 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM38O00635 NRBF2P1-201ENST00000587407 859 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.01□□□□□ -1.77
TRIM38O00635 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM38O00635 AL360085.1-201ENST00000604713 532 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 AL035413.2-201ENST00000604801 525 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 AC103710.1-201ENST00000610003 901 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 AL592295.2-201ENST00000612578 206 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
TRIM38O00635 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM38O00635 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM38O00635 PISRT1-201ENST00000626175 531 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 AC012442.3-202ENST00000636742 206 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM38O00635 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM38O00635 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
TRIM38O00635 FARSBP1-201ENST00000435808 1778 ntBASIC4.01□□□□□ -1.77
TRIM38O00635 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM38O00635 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM38O00635 MARK2P15-201ENST00000432204 2186 ntBASIC4□□□□□ -1.77
TRIM38O00635 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TRIM38O00635 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4□□□□□ -1.77
TRIM38O00635 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4□□□□□ -1.77
TRIM38O00635 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM38O00635 Y_RNA.460-201ENST00000384255 102 ntBASIC4□□□□□ -1.77
TRIM38O00635 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4□□□□□ -1.77
TRIM38O00635 HSPE1P26-201ENST00000405341 275 ntBASIC4□□□□□ -1.77
TRIM38O00635 MIR1183-201ENST00000408856 89 ntBASIC4□□□□□ -1.77
TRIM38O00635 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM38O00635 AC007390.1-201ENST00000415722 356 ntBASIC4□□□□□ -1.77
TRIM38O00635 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4□□□□□ -1.77
TRIM38O00635 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM38O00635 AL691449.1-201ENST00000426570 421 ntBASIC4□□□□□ -1.77
TRIM38O00635 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4□□□□□ -1.77
TRIM38O00635 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4□□□□□ -1.77
TRIM38O00635 AL133547.1-201ENST00000448546 220 ntBASIC4□□□□□ -1.77
TRIM38O00635 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4□□□□□ -1.77
TRIM38O00635 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4□□□□□ -1.77
TRIM38O00635 AC106872.2-201ENST00000494303 480 ntBASIC4□□□□□ -1.77
TRIM38O00635 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4□□□□□ -1.77
TRIM38O00635 HMGN1P13-201ENST00000505795 138 ntBASIC4□□□□□ -1.77
TRIM38O00635 RNA5SP468-201ENST00000516782 93 ntBASIC4□□□□□ -1.77
TRIM38O00635 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4□□□□□ -1.77
TRIM38O00635 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4□□□□□ -1.77
TRIM38O00635 AC022690.1-201ENST00000526681 550 ntBASIC4□□□□□ -1.77
TRIM38O00635 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4□□□□□ -1.77
TRIM38O00635 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4□□□□□ -1.77
TRIM38O00635 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4□□□□□ -1.77
TRIM38O00635 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4□□□□□ -1.77
TRIM38O00635 HMGB1P33-201ENST00000563485 527 ntBASIC4□□□□□ -1.77
TRIM38O00635 RPL23AP87-202ENST00000573039 466 ntBASIC4□□□□□ -1.77
TRIM38O00635 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4□□□□□ -1.77
TRIM38O00635 HMGN1P30-201ENST00000589286 268 ntBASIC4□□□□□ -1.77
TRIM38O00635 AC104662.1-201ENST00000604448 511 ntBASIC4□□□□□ -1.77
TRIM38O00635 uc_338.32-201ENST00000615087 172 ntBASIC4□□□□□ -1.77
TRIM38O00635 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TRIM38O00635 AC136475.10-201ENST00000620253 385 ntBASIC4□□□□□ -1.77
TRIM38O00635 AL354798.1-201ENST00000622505 329 ntBASIC4□□□□□ -1.77
TRIM38O00635 AC090574.1-201ENST00000623186 233 ntBASIC4□□□□□ -1.77
TRIM38O00635 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4□□□□□ -1.77
TRIM38O00635 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4□□□□□ -1.77
TRIM38O00635 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4□□□□□ -1.77
TRIM38O00635 AL773545.4-201ENST00000637262 310 ntBASIC4□□□□□ -1.77
TRIM38O00635 AL513478.4-201ENST00000641636 310 ntBASIC4□□□□□ -1.77
TRIM38O00635 MAPK10-373ENST00000641983 6772 ntBASIC4□□□□□ -1.77
TRIM38O00635 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM38O00635 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
TRIM38O00635 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
TRIM38O00635 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM38O00635 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
TRIM38O00635 AC024560.2-201ENST00000507981 1497 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM38O00635 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM38O00635 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM38O00635 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM38O00635 GNG5P1-201ENST00000255500 204 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
TRIM38O00635 MIR208A-201ENST00000362287 71 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 RNA5SP124-201ENST00000362739 110 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 RNU6-213P-201ENST00000384051 104 ntBASIC3.99□□□□□ -1.77
TRIM38O00635 AL590704.1-201ENST00000402856 794 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms