Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NUTF2P7-201ENST00000453086 375 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 RPL7L1P8-201ENST00000469911 741 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AC103987.1-201ENST00000473394 348 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 RPL31P60-201ENST00000478450 367 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AC079382.1-201ENST00000493346 557 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXN3O00409 AL359273.1-201ENST00000510918 627 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 RN7SKP209-201ENST00000516888 304 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXN3O00409 RPS3AP4-201ENST00000555161 764 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 ZNF519P2-201ENST00000557032 169 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AP005205.1-201ENST00000563503 508 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AC055876.1-202ENST00000567053 138 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXN3O00409 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXN3O00409 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXN3O00409 AC090517.2-201ENST00000614966 680 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 FRG1KP-201ENST00000623592 341 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AC124864.2-201ENST00000624736 186 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.03□□□□□ -1.76
FOXN3O00409 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXN3O00409 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXN3O00409 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
FOXN3O00409 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXN3O00409 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
FOXN3O00409 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
FOXN3O00409 RNU6-1284P-201ENST00000363701 100 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 Y_RNA.372-201ENST00000365599 102 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 Y_RNA.381-201ENST00000365666 102 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXN3O00409 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
FOXN3O00409 RPL17P50-201ENST00000396131 546 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 RAP1BP3-201ENST00000407180 549 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC069157.1-201ENST00000421749 137 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 ISCA1P1-201ENST00000426679 387 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXN3O00409 AC122718.1-201ENST00000439448 744 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXN3O00409 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXN3O00409 GAPDHP27-201ENST00000447427 1020 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 Z99127.3-201ENST00000448158 395 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 HMGN2P16-201ENST00000456802 261 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXN3O00409 FAM133DP-201ENST00000464802 691 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AL121769.1-201ENST00000469473 401 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC092989.1-201ENST00000481235 277 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 HMGB1P29-201ENST00000505659 499 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXN3O00409 RNA5SP164-201ENST00000516533 110 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 RNU6-410P-201ENST00000517006 107 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC090572.1-201ENST00000519251 160 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AP001804.3-201ENST00000525146 880 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 OR8R1P-201ENST00000543943 764 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC124947.2-202ENST00000552735 133 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC068135.2-201ENST00000569293 1028 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC053481.4-201ENST00000583164 216 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC008536.2-201ENST00000607284 349 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXN3O00409 U4.5-201ENST00000617137 123 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 PLCE1P1-201ENST00000622094 305 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 AL354798.1-201ENST00000622505 329 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 CR381653.2-201ENST00000624041 768 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.02□□□□□ -1.77
FOXN3O00409 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXN3O00409 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.02□□□□□ -1.77
FOXN3O00409 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
FOXN3O00409 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXN3O00409 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
FOXN3O00409 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.01□□□□□ -1.77
FOXN3O00409 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
FOXN3O00409 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
FOXN3O00409 HSPE1P11-201ENST00000339579 310 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
FOXN3O00409 RNU6-1103P-201ENST00000384150 107 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 MIR1-2-201ENST00000384961 85 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 MIR591-201ENST00000385290 95 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
FOXN3O00409 MTCO3P40-201ENST00000392516 676 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 RN7SKP140-201ENST00000411196 284 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXN3O00409 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXN3O00409 RAC1P6-201ENST00000423911 575 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXN3O00409 NDUFB1P1-201ENST00000435191 180 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 SNORD97-201ENST00000459187 142 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 RPS27AP1-201ENST00000475545 471 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXN3O00409 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXN3O00409 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXN3O00409 RN7SKP83-201ENST00000516512 178 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 MIR2116-201ENST00000517221 80 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 AC100870.1-201ENST00000522035 505 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 IGKV2D-19-201ENST00000523346 262 ntBASIC4.01□□□□□ -1.77
FOXN3O00409 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXN3O00409 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.01□□□□□ -1.77
FOXN3O00409 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXN3O00409 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.01□□□□□ -1.77
FOXN3O00409 MIR5047-201ENST00000579212 100 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms