Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.27□□□□□ -1.89
O00370 AL031183.1-201ENST00000457667 207 ntBASIC3.27□□□□□ -1.89
O00370 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.27□□□□□ -1.89
O00370 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.27□□□□□ -1.89
O00370 Y_RNA.688-201ENST00000516565 95 ntBASIC3.27□□□□□ -1.89
O00370 RNU6-798P-201ENST00000516912 103 ntBASIC3.27□□□□□ -1.89
O00370 AC025881.1-201ENST00000518851 512 ntBASIC3.27□□□□□ -1.89
O00370 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.27□□□□□ -1.89
O00370 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.27□□□□□ -1.89
O00370 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.27□□□□□ -1.89
O00370 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.27□□□□□ -1.89
O00370 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.27□□□□□ -1.89
O00370 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.27□□□□□ -1.89
O00370 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.27□□□□□ -1.89
O00370 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.27□□□□□ -1.89
O00370 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.27□□□□□ -1.89
O00370 AC012443.1-201ENST00000605605 231 ntBASIC3.27□□□□□ -1.89
O00370 AC092354.1-201ENST00000606057 376 ntBASIC3.27□□□□□ -1.89
O00370 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.27□□□□□ -1.89
O00370 AP002826.1-201ENST00000608835 315 ntBASIC3.27□□□□□ -1.89
O00370 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.27□□□□□ -1.89
O00370 MIR7844-201ENST00000616161 122 ntBASIC3.27□□□□□ -1.89
O00370 MIR8057-201ENST00000620957 69 ntBASIC3.27□□□□□ -1.89
O00370 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.27□□□□□ -1.89
O00370 AC010733.2-201ENST00000589496 5702 ntBASIC3.27□□□□□ -1.89
O00370 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
O00370 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.27□□□□□ -1.89
O00370 ZNF833P-201ENST00000424938 1494 ntBASIC3.27□□□□□ -1.89
O00370 AC092447.10-201ENST00000620607 1652 ntBASIC3.27□□□□□ -1.89
O00370 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
O00370 AC012321.1-201ENST00000561622 1588 ntBASIC3.26□□□□□ -1.89
O00370 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
O00370 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
O00370 Y_RNA.97-201ENST00000363094 102 ntBASIC3.26□□□□□ -1.89
O00370 RNU6-1155P-201ENST00000363554 107 ntBASIC3.26□□□□□ -1.89
O00370 SNORA14A-201ENST00000364773 135 ntBASIC3.26□□□□□ -1.89
O00370 RNU6-769P-201ENST00000384407 104 ntBASIC3.26□□□□□ -1.89
O00370 MIR135A2-201ENST00000384854 100 ntBASIC3.26□□□□□ -1.89
O00370 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.26□□□□□ -1.89
O00370 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.26□□□□□ -1.89
O00370 AL512286.1-201ENST00000439244 400 ntBASIC3.26□□□□□ -1.89
O00370 FAM103A2P-201ENST00000444122 354 ntBASIC3.26□□□□□ -1.89
O00370 AL590664.1-201ENST00000448065 339 ntBASIC3.26□□□□□ -1.89
O00370 MTCO1P42-201ENST00000457379 726 ntBASIC3.26□□□□□ -1.89
O00370 SETP11-201ENST00000473027 690 ntBASIC3.26□□□□□ -1.89
O00370 AC108860.1-201ENST00000484521 383 ntBASIC3.26□□□□□ -1.89
O00370 RNU6-528P-201ENST00000516926 100 ntBASIC3.26□□□□□ -1.89
O00370 FAM60DP-201ENST00000524174 632 ntBASIC3.26□□□□□ -1.89
O00370 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.26□□□□□ -1.89
O00370 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.26□□□□□ -1.89
O00370 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.26□□□□□ -1.89
O00370 AC060771.1-201ENST00000582031 164 ntBASIC3.26□□□□□ -1.89
O00370 MIR548AB-201ENST00000584917 84 ntBASIC3.26□□□□□ -1.89
O00370 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.26□□□□□ -1.89
O00370 AC010620.1-201ENST00000601088 1102 ntBASIC3.26□□□□□ -1.89
O00370 AC013444.2-201ENST00000603317 787 ntBASIC3.26□□□□□ -1.89
O00370 AC105129.3-201ENST00000605455 485 ntBASIC3.26□□□□□ -1.89
O00370 AC093591.3-201ENST00000634516 308 ntBASIC3.26□□□□□ -1.89
O00370 AL355596.1-201ENST00000565399 3996 ntBASIC3.26□□□□□ -1.89
O00370 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
O00370 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
O00370 MAPK10-362ENST00000641864 4484 ntBASIC3.25□□□□□ -1.89
O00370 AC006378.2-201ENST00000623178 2476 ntBASIC3.25□□□□□ -1.89
O00370 RNU5A-2P-201ENST00000384337 116 ntBASIC3.25□□□□□ -1.89
O00370 SNORA1.3-201ENST00000384676 136 ntBASIC3.25□□□□□ -1.89
O00370 RPL7P25-201ENST00000404151 721 ntBASIC3.25□□□□□ -1.89
O00370 MIR1305-201ENST00000408300 86 ntBASIC3.25□□□□□ -1.89
O00370 AL359704.1-201ENST00000411586 781 ntBASIC3.25□□□□□ -1.89
O00370 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.25□□□□□ -1.89
O00370 AC091390.3-201ENST00000426478 338 ntBASIC3.25□□□□□ -1.89
O00370 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.25□□□□□ -1.89
O00370 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.25□□□□□ -1.89
O00370 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.25□□□□□ -1.89
O00370 GDI2P2-201ENST00000445131 608 ntBASIC3.25□□□□□ -1.89
O00370 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.25□□□□□ -1.89
O00370 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.25□□□□□ -1.89
O00370 AC068724.1-201ENST00000487100 792 ntBASIC3.25□□□□□ -1.89
O00370 RN7SL20P-201ENST00000488827 297 ntBASIC3.25□□□□□ -1.89
O00370 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.25□□□□□ -1.89
O00370 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.25□□□□□ -1.89
O00370 AC008885.1-201ENST00000514930 301 ntBASIC3.25□□□□□ -1.89
O00370 AC026801.2-201ENST00000515352 425 ntBASIC3.25□□□□□ -1.89
O00370 RN7SKP43-201ENST00000516173 320 ntBASIC3.25□□□□□ -1.89
O00370 RN7SKP57-201ENST00000517248 293 ntBASIC3.25□□□□□ -1.89
O00370 AC060788.1-201ENST00000521318 469 ntBASIC3.25□□□□□ -1.89
O00370 AL356057.1-201ENST00000533798 831 ntBASIC3.25□□□□□ -1.89
O00370 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.25□□□□□ -1.89
O00370 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.25□□□□□ -1.89
O00370 MIR4307-201ENST00000582802 84 ntBASIC3.25□□□□□ -1.89
O00370 TPMTP1-201ENST00000592307 737 ntBASIC3.25□□□□□ -1.89
O00370 AP001981.2-201ENST00000603241 418 ntBASIC3.25□□□□□ -1.89
O00370 AL022161.1-201ENST00000604390 213 ntBASIC3.25□□□□□ -1.89
O00370 AL160281.1-201ENST00000605307 311 ntBASIC3.25□□□□□ -1.89
O00370 AL158211.4-201ENST00000606988 584 ntBASIC3.25□□□□□ -1.89
O00370 AC112204.3-201ENST00000623822 332 ntBASIC3.25□□□□□ -1.89
O00370 AC084035.1-201ENST00000634543 607 ntBASIC3.25□□□□□ -1.89
O00370 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
O00370 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.24□□□□□ -1.89
O00370 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
O00370 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms