Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC013828.2-201ENST00000532487 235 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.84□□□□□ -1.95
PDLIM1O00151 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.84□□□□□ -1.95
PDLIM1O00151 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.84□□□□□ -1.95
PDLIM1O00151 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.84□□□□□ -1.95
PDLIM1O00151 ISCA1P3-201ENST00000577104 373 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 MIR3921-201ENST00000577308 85 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 MIR4446-201ENST00000578505 67 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 MIR5195-201ENST00000583555 115 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.84□□□□□ -1.95
PDLIM1O00151 AC021171.1-201ENST00000603137 706 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.84□□□□□ -1.95
PDLIM1O00151 AC011890.2-201ENST00000613393 294 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 AP000770.2-201ENST00000623694 100 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 AL159972.1-201ENST00000625150 448 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 MIR3651-201ENST00000630427 90 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.84□□□□□ -1.95
PDLIM1O00151 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.96
PDLIM1O00151 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PDLIM1O00151 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.83□□□□□ -1.96
PDLIM1O00151 AL391994.1-201ENST00000254724 282 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AP000568.1-201ENST00000282964 442 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PDLIM1O00151 RNA5SP387-201ENST00000364226 106 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 RNA5SP139-201ENST00000364340 117 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 DEFA7P-201ENST00000382676 285 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 SNORA9-201ENST00000384215 133 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 TAS2R15P-201ENST00000390674 928 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 MIR1305-201ENST00000408300 86 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.83□□□□□ -1.96
PDLIM1O00151 MTND2P24-201ENST00000453434 806 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.83□□□□□ -1.96
PDLIM1O00151 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.83□□□□□ -1.96
PDLIM1O00151 KC877373.1-201ENST00000479066 408 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.83□□□□□ -1.96
PDLIM1O00151 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PDLIM1O00151 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.83□□□□□ -1.96
PDLIM1O00151 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.83□□□□□ -1.96
PDLIM1O00151 AP004247.1-201ENST00000531556 1289 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 ZNF321P-202ENST00000550843 495 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.83□□□□□ -1.96
PDLIM1O00151 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.83□□□□□ -1.96
PDLIM1O00151 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AC060771.1-201ENST00000582031 164 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.83□□□□□ -1.96
PDLIM1O00151 TPMTP1-201ENST00000592307 737 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AC079089.3-201ENST00000603094 673 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AP000811.1-201ENST00000603803 651 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 PRELID3BP8-201ENST00000604148 295 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AL020991.1-201ENST00000612314 373 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AL355493.4-201ENST00000618530 292 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AC009268.2-201ENST00000621925 457 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 AC002064.3-201ENST00000623448 346 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.83□□□□□ -1.96
PDLIM1O00151 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.83□□□□□ -1.96
PDLIM1O00151 AC099063.3-201ENST00000642066 185 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 MTND4P16-201ENST00000466108 1367 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.83□□□□□ -1.96
PDLIM1O00151 AC012321.1-201ENST00000561622 1588 ntBASIC2.83□□□□□ -1.96
PDLIM1O00151 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
PDLIM1O00151 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PDLIM1O00151 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PDLIM1O00151 OR1S2-201ENST00000302592 978 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 MIR6073-201ENST00000352083 89 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 RNU5E-8P-201ENST00000363502 116 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.82□□□□□ -1.96
PDLIM1O00151 PPP1R11P2-201ENST00000423543 382 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 RPL7L1P10-201ENST00000427790 463 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 UBE2FP3-201ENST00000436366 524 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AC006028.1-201ENST00000438379 402 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.82□□□□□ -1.96
PDLIM1O00151 AL831737.1-201ENST00000441288 271 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.82□□□□□ -1.96
PDLIM1O00151 MTCYBP3-201ENST00000445588 1137 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PDLIM1O00151 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.82□□□□□ -1.96
PDLIM1O00151 RPS29P12-201ENST00000460178 152 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 HSPE1P6-201ENST00000479457 291 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AL049874.1-201ENST00000489560 388 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 RN7SL504P-201ENST00000494496 287 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 LTV1P1-201ENST00000510683 1237 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.82□□□□□ -1.96
PDLIM1O00151 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.82□□□□□ -1.96
PDLIM1O00151 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.82□□□□□ -1.96
PDLIM1O00151 RNU6-678P-201ENST00000516832 109 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 RNU6-798P-201ENST00000516912 103 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 SNORA31.22-201ENST00000517204 135 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.82□□□□□ -1.96
PDLIM1O00151 AC068587.4-201ENST00000533893 186 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AL133271.1-201ENST00000538229 291 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.82□□□□□ -1.96
PDLIM1O00151 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.82□□□□□ -1.96
PDLIM1O00151 MIR544B-201ENST00000582372 78 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.82□□□□□ -1.96
PDLIM1O00151 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.82□□□□□ -1.96
PDLIM1O00151 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.82□□□□□ -1.96
PDLIM1O00151 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.82□□□□□ -1.96
PDLIM1O00151 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.82□□□□□ -1.96
PDLIM1O00151 AC138932.5-201ENST00000617759 563 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms