Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SNORD26-201ENST00000384147 75 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 MIR183-201ENST00000384958 110 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU6-750P-201ENST00000390946 107 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 RNA5SP212-201ENST00000391223 107 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AL035410.1-201ENST00000427409 427 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 RPL30P4-201ENST00000429309 333 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AL050321.1-201ENST00000432363 400 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AC010881.1-201ENST00000433830 235 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 DDX3P2-201ENST00000446138 111 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 BX510359.1-201ENST00000456973 237 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AC104090.1-201ENST00000506341 1171 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AC093752.1-206ENST00000511823 336 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 EEF1A1P37-201ENST00000522748 715 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AP005597.4-201ENST00000526762 229 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AC013444.2-201ENST00000603317 787 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AL137790.1-201ENST00000634283 177 ntBASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CHKB-CPT1BH3BT56 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU1-73P-201ENST00000383971 164 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 MIR150-201ENST00000385048 84 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AL445183.3-201ENST00000414168 502 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 UBE2V1P9-201ENST00000414760 368 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 BOLA3P4-201ENST00000418151 400 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AJ239321.1-201ENST00000424255 564 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC000041.1-201ENST00000439655 175 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 HIGD1AP2-201ENST00000446367 280 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 MRPS17P3-201ENST00000465453 385 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 MTAPP1-201ENST00000489154 819 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 HMGB1P35-201ENST00000503360 598 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 RNA5SP148-201ENST00000516527 94 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 IGKV3-31-201ENST00000523109 329 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 SNRPGP18-201ENST00000553000 214 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC105245.1-201ENST00000581934 244 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 VN1R90P-201ENST00000595717 726 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC004775.1-201ENST00000607389 753 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC008498.1-201ENST00000613012 531 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC022202.1-201ENST00000613515 211 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC068722.2-201ENST00000618734 544 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC039056.2-201ENST00000622261 511 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 AC090772.4-201ENST00000623599 362 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 Z99571.1-201ENST00000636677 394 ntBASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC0.89□□□□□ -2.27
CHKB-CPT1BH3BT56 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 ZNF29P-201ENST00000225587 168 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU6-444P-201ENST00000383988 108 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 MIR585-201ENST00000384887 94 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 NDUFS5P1-201ENST00000405668 289 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 ATF1P1-201ENST00000406040 927 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU6ATAC10P-201ENST00000408635 111 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 U6atac.2-201ENST00000408644 118 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU2-49P-201ENST00000410666 184 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AL139156.1-201ENST00000412785 841 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 NDUFB4P7-201ENST00000423198 363 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 RPS15AP5-201ENST00000436276 388 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AC092393.1-201ENST00000439625 742 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 RAC1P7-201ENST00000445367 377 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AL592447.1-201ENST00000447592 540 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 RSL24D1P3-201ENST00000449255 495 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 SNORD121B-201ENST00000458838 81 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 ANXA2P1-201ENST00000505539 926 ntBASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.88□□□□□ -2.27
CHKB-CPT1BH3BT56 FAM206BP-201ENST00000510179 541 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms