Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR4446-201ENST00000578505 67 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 AC002550.2-201ENST00000621246 394 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
COL6A5A8TX70 MIR124-3-201ENST00000384866 87 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 MIR1197-201ENST00000408818 88 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 RNA5SP266-201ENST00000410273 108 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A5A8TX70 AL591212.2-201ENST00000433923 257 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 Z85994.2-201ENST00000434327 452 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A5A8TX70 AC146507.1-201ENST00000468335 354 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 AC005912.1-201ENST00000495392 255 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.06□□□□□ -2.24
COL6A5A8TX70 AC008837.2-201ENST00000513076 418 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 CBX3P8-201ENST00000532412 525 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A5A8TX70 NOP56P3-201ENST00000549457 385 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A5A8TX70 OR4K8P-201ENST00000578842 1048 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 AL020996.3-201ENST00000606617 222 ntBASIC1.06□□□□□ -2.24
COL6A5A8TX70 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.06□□□□□ -2.24
COL6A5A8TX70 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
COL6A5A8TX70 AL033519.2-201ENST00000403958 392 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.05□□□□□ -2.24
COL6A5A8TX70 MTCYBP37-201ENST00000510642 1133 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.05□□□□□ -2.24
COL6A5A8TX70 HSPE1P20-201ENST00000538133 289 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 AP000560.1-201ENST00000624150 1937 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
COL6A5A8TX70 HSPE1P11-201ENST00000339579 310 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 RNA5SP167-201ENST00000365461 116 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.05□□□□□ -2.24
COL6A5A8TX70 FCF1P2-201ENST00000415284 583 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 AC060773.1-201ENST00000421698 310 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 MTND4LP3-201ENST00000468320 276 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.05□□□□□ -2.24
COL6A5A8TX70 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.05□□□□□ -2.24
COL6A5A8TX70 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.05□□□□□ -2.24
COL6A5A8TX70 ACTR3BP3-201ENST00000565577 979 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 MIR5589-201ENST00000579442 60 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 GAS5-AS1-201ENST00000602767 694 ntBASIC1.05□□□□□ -2.24
COL6A5A8TX70 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.05□□□□□ -2.24
COL6A5A8TX70 ANAPC10P1-201ENST00000395991 556 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.04□□□□□ -2.24
COL6A5A8TX70 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.04□□□□□ -2.24
COL6A5A8TX70 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A5A8TX70 MTCO1P43-201ENST00000431831 488 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.04□□□□□ -2.24
COL6A5A8TX70 OR10R1P-201ENST00000441524 1141 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A5A8TX70 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A5A8TX70 MTCO3P24-201ENST00000572729 782 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 CBX3P2-202ENST00000583365 535 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A5A8TX70 PABPC1P7-201ENST00000413177 1513 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
COL6A5A8TX70 AC012321.1-201ENST00000561622 1588 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 MTCO1P6-201ENST00000481192 1384 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 RNU6-48P-201ENST00000384161 107 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 RNU6-43P-201ENST00000384302 107 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 HMGN2P38-201ENST00000423806 265 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.04□□□□□ -2.24
COL6A5A8TX70 IPO7P1-201ENST00000442031 636 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 BMI1P1-201ENST00000445879 941 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A5A8TX70 AC108059.3-201ENST00000456388 214 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 RPS29P20-201ENST00000489592 171 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 ARL2BPP4-201ENST00000506854 471 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 RNA5SP285-201ENST00000516619 119 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 AC074029.2-201ENST00000551045 634 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 MIR3935-201ENST00000583472 104 ntBASIC1.04□□□□□ -2.24
COL6A5A8TX70 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL6A5A8TX70 MIR144-201ENST00000384886 86 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 AP000567.1-201ENST00000406413 156 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 CYCSP48-201ENST00000417124 323 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 AC099548.1-201ENST00000421443 426 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.03□□□□□ -2.24
COL6A5A8TX70 AC119618.1-201ENST00000434191 222 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.03□□□□□ -2.24
COL6A5A8TX70 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.03□□□□□ -2.24
COL6A5A8TX70 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL6A5A8TX70 HMGB3P30-201ENST00000457863 606 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.03□□□□□ -2.24
COL6A5A8TX70 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.03□□□□□ -2.24
COL6A5A8TX70 AC007742.2-201ENST00000618226 398 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.03□□□□□ -2.24
COL6A5A8TX70 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL6A5A8TX70 MIR1304-201ENST00000408243 91 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 PGBD4P6-201ENST00000421501 610 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 AC099336.2-201ENST00000422457 254 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 MTND4LP12-201ENST00000448237 295 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL6A5A8TX70 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.03□□□□□ -2.24
COL6A5A8TX70 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.03□□□□□ -2.24
COL6A5A8TX70 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.03□□□□□ -2.24
COL6A5A8TX70 MIR4636-201ENST00000582271 80 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 AC073413.2-201ENST00000604332 360 ntBASIC1.03□□□□□ -2.24
COL6A5A8TX70 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms