Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 RNU4-51P-201ENST00000364206 140 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 SNORA1.3-201ENST00000384676 136 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 RPL23AP29-201ENST00000397284 453 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 HNRNPDP2-201ENST00000406475 478 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AL356867.1-201ENST00000429623 299 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 RNF2P1-201ENST00000442955 1010 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 OR6K5P-201ENST00000447050 945 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AC010099.1-201ENST00000455434 375 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 ANKRD26P4-201ENST00000455755 950 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AP000926.3-201ENST00000497201 299 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 MRPS17P9-201ENST00000511924 393 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 OR4P1P-201ENST00000530808 1136 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AL160236.1-201ENST00000556317 195 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 AC116312.1-201ENST00000606841 314 ntBASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CPSF4LA6NMK7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.03□□□□□ -2.25
CPSF4LA6NMK7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 NUP35P2-201ENST00000416748 943 ntBASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 AL031663.1-201ENST00000437445 219 ntBASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 SNRPGP6-201ENST00000451124 220 ntBASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 AC131280.1-202ENST00000624067 4211 ntBASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 MFSD8-213ENST00000641134 1327 ntBASIC1.02□□□□□ -2.25
CPSF4LA6NMK7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 RNA5SP99-201ENST00000364020 114 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 XKRYP1-201ENST00000423438 492 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 XKRYP2-201ENST00000432915 492 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 RPL31P41-201ENST00000477967 372 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AC092902.1-201ENST00000486999 259 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AC022662.1-201ENST00000580252 331 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 VN1R80P-201ENST00000597126 338 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AL355297.2-201ENST00000604792 129 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AC055764.2-201ENST00000610089 670 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 TUG1_1.1-201ENST00000610654 145 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 AC015726.3-201ENST00000624501 418 ntBASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CPSF4LA6NMK7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CPSF4LA6NMK7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC1□□□□□ -2.25
CPSF4LA6NMK7 MIR513A1-201ENST00000385138 129 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 RNU6-920P-201ENST00000410926 92 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 AC092648.1-201ENST00000425870 423 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1□□□□□ -2.25
CPSF4LA6NMK7 Z80107.1-201ENST00000436830 412 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1□□□□□ -2.25
CPSF4LA6NMK7 SNORD97-201ENST00000459187 142 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1□□□□□ -2.25
CPSF4LA6NMK7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1□□□□□ -2.25
CPSF4LA6NMK7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1□□□□□ -2.25
CPSF4LA6NMK7 RN7SKP219-201ENST00000516825 296 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 MTND4LP24-201ENST00000572277 291 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 PCNAP1-202ENST00000595299 752 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 HSPE1P7-201ENST00000604681 321 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 OR10AB1P-201ENST00000609613 938 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1□□□□□ -2.25
CPSF4LA6NMK7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1□□□□□ -2.25
CPSF4LA6NMK7 AC008669.1-201ENST00000565823 2178 ntBASIC1□□□□□ -2.25
CPSF4LA6NMK7 AL137003.2-201ENST00000606924 2538 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 BTF3P4-201ENST00000418852 495 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 RPS6P15-201ENST00000431996 751 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 Z77249.1-201ENST00000444622 1175 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 HMGN2P10-201ENST00000448085 265 ntBASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.99□□□□□ -2.25
CPSF4LA6NMK7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms