Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC011477.1-204ENST00000623416 1325 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC004944.1-201ENST00000517807 3059 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 RNA5SP68-201ENST00000363885 119 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-723P-201ENST00000383973 107 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-1207P-201ENST00000384343 107 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC119751.3-201ENST00000399720 670 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL590084.2-201ENST00000401481 382 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 RNA5SP508-201ENST00000411327 119 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 MTCO2P5-201ENST00000422621 426 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL035407.1-201ENST00000429211 571 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 RPL7P34-201ENST00000433316 712 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 RPL36AP6-201ENST00000435770 321 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 RSU1P2-202ENST00000437884 485 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 MTND4P6-201ENST00000438297 472 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL354941.1-201ENST00000438600 464 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 MTND5P2-201ENST00000442927 1142 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AP000542.1-201ENST00000448473 371 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 MTCO3P11-201ENST00000455103 774 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 RNU7-125P-201ENST00000458760 62 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 snoU13.4-201ENST00000458916 104 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 VN1R17P-201ENST00000472048 1090 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL024509.2-201ENST00000493462 493 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 KLHL2P1-201ENST00000508691 521 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-759P-201ENST00000516740 103 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC100870.1-201ENST00000522035 505 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AP001646.1-201ENST00000527936 915 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AP003461.1-201ENST00000528866 78 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC125611.2-201ENST00000551907 647 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AP005205.1-201ENST00000563503 508 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 BDH2P1-201ENST00000602288 736 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC021171.1-201ENST00000603137 706 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AL355812.1-201ENST00000603215 216 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 DUXAP11-201ENST00000603858 526 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 BCRP9-201ENST00000605312 388 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC002076.2-201ENST00000617362 122 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC010149.2-201ENST00000637608 315 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC104454.1-201ENST00000421341 1401 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC087359.1-201ENST00000508335 1740 ntBASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV40A0A0B4J280 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 MIR591-201ENST00000385290 95 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-882P-201ENST00000391025 103 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AL445529.1-201ENST00000398713 389 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC098592.1-201ENST00000419352 333 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 THAP5P1-201ENST00000439089 262 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 ARPC3P5-201ENST00000448802 534 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 RPL23AP35-201ENST00000451906 501 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC104308.1-201ENST00000454621 333 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 RPL23AP31-201ENST00000456160 467 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 MTND2P14-201ENST00000482139 351 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC109464.2-201ENST00000510242 943 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 RNA5SP282-201ENST00000516355 108 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 SNORA31.26-201ENST00000517250 137 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 DUXAP5-201ENST00000529668 529 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AP000857.1-201ENST00000532151 543 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC013828.2-201ENST00000532487 235 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC109446.2-201ENST00000567872 497 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC010653.1-201ENST00000571108 881 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC008751.2-201ENST00000597885 980 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC007621.1-201ENST00000604544 437 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC106791.2-201ENST00000604680 391 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC106900.2-201ENST00000604994 317 ntBASIC2.12□□□□□ -2.07
TRAV40A0A0B4J280 AC080013.4-201ENST00000607624 649 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms