Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC109471.1-201ENST00000511631 612 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 ATP5F1P5-201ENST00000526403 760 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 COX6CP5-201ENST00000527162 228 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC011611.5-201ENST00000552477 578 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC023824.2-201ENST00000566185 400 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC005498.1-201ENST00000592125 465 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 MIR6817-201ENST00000615588 66 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AL449363.1-201ENST00000617815 186 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC025034.2-201ENST00000623264 286 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AC132825.7-201ENST00000638744 335 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 OR5H6-203ENST00000642105 978 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AL022578.1-201ENST00000439330 1433 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 AL354685.2-201ENST00000448218 1447 ntBASIC1.55□□□□□ -2.16
TRAV1-1A0A0B4J248 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 RNU6-878P-201ENST00000384578 110 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 MIR767-201ENST00000390228 109 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AL356057.1-202ENST00000402263 756 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AL450338.1-201ENST00000407987 512 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 SPA17P1-201ENST00000416656 452 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 PSMA6P3-201ENST00000428242 164 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC092155.2-201ENST00000454675 477 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 RNU7-26P-201ENST00000458980 63 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 RPL32P14-201ENST00000463196 378 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC126389.1-201ENST00000477436 290 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 RPL21P47-201ENST00000483696 477 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC022483.1-201ENST00000514020 567 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 RNA5SP148-201ENST00000516527 94 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 SNRPGP18-201ENST00000553000 214 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 NIFKP8-201ENST00000560500 874 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC093519.1-201ENST00000566109 298 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 MIR5089-201ENST00000580047 84 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC107214.2-201ENST00000608204 634 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC006213.4-201ENST00000616184 634 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC005858.4-201ENST00000623191 700 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 AC106730.3-201ENST00000624568 641 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 CTSLP2-204ENST00000629029 392 ntBASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
TRAV1-1A0A0B4J248 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 SNORA38-201ENST00000363946 132 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 SNORA46.1-201ENST00000391069 153 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 MTCO2P31-201ENST00000402702 684 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 DBF4P1-201ENST00000412976 1892 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC092047.1-201ENST00000424997 240 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 TRIM60P13-201ENST00000432350 1283 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AL049641.1-201ENST00000441055 1948 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 ELF2P3-201ENST00000445099 1506 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 BMI1P1-201ENST00000445879 941 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 GTF2IP12-201ENST00000456547 356 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC108729.2-201ENST00000476543 840 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 COX7A2P2-201ENST00000505291 250 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC118282.2-201ENST00000508739 374 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC093281.2-201ENST00000510153 597 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC118465.1-201ENST00000513820 1271 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 IGKV3-31-201ENST00000523109 329 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC118942.1-201ENST00000529674 1035 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AL390838.2-201ENST00000602394 274 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AL031176.1-201ENST00000604554 466 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AL033523.1-201ENST00000605153 153 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AL450270.1-201ENST00000606160 391 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC135507.1-201ENST00000607214 561 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 VN1R9P-201ENST00000614184 867 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 AC091932.3-201ENST00000624223 323 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 MIR7515-201ENST00000637837 67 ntBASIC1.53□□□□□ -2.16
TRAV1-1A0A0B4J248 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
TRAV1-1A0A0B4J248 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
TRAV1-1A0A0B4J248 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms