Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 AP005435.4-201ENST00000529514 284 ntBASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
TRAV30A0A087WSZ9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
TRAV30A0A087WSZ9 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.2
TRAV30A0A087WSZ9 HSPA8P4-201ENST00000511877 1920 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 SNORD48-201ENST00000364953 64 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 SNORA70B-201ENST00000384210 135 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 RN7SKP158-201ENST00000410453 326 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 RPL23AP39-201ENST00000415533 405 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 AC093106.2-201ENST00000428212 385 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 USP9YP15-201ENST00000442391 422 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 RPS26P30-201ENST00000443431 335 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 RNU6-928P-201ENST00000516876 104 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 SNORA48.10-201ENST00000516965 160 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 AC118273.2-201ENST00000532092 465 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 POLR2KP1-201ENST00000553226 168 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 OR4K8P-201ENST00000578842 1048 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 AC124283.4-201ENST00000581815 456 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 AF131215.7-201ENST00000602443 707 ntBASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
TRAV30A0A087WSZ9 RNU4-23P-201ENST00000362839 140 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 RNU6-173P-201ENST00000364215 104 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 Z98749.2-208ENST00000381646 500 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 MIR9-3-201ENST00000385084 90 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 MCTS2P-201ENST00000394552 546 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC096920.1-201ENST00000423991 241 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 RPL27AP8-201ENST00000424277 446 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AL512661.1-201ENST00000434586 1253 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 DNAJC19P4-201ENST00000440115 345 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AL357134.1-201ENST00000445848 426 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC068587.2-201ENST00000478386 781 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC027575.1-201ENST00000481064 460 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC104564.1-201ENST00000493028 407 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC092436.1-201ENST00000506450 503 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AP001960.1-201ENST00000506494 658 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC119751.5-201ENST00000514077 770 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC008676.3-201ENST00000521237 435 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 HMGB1P1-201ENST00000522557 636 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC092470.1-201ENST00000546187 132 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC091544.4-201ENST00000555268 342 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 MIR502-201ENST00000606349 86 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC093673.2-201ENST00000609674 331 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 AC103710.2-201ENST00000609912 942 ntBASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
TRAV30A0A087WSZ9 SNORD114-1-201ENST00000362705 72 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 RNU6-1197P-201ENST00000391183 107 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 AL079342.1-201ENST00000401460 267 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 OR9R1P-201ENST00000412200 877 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 AC090774.1-201ENST00000435925 246 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 TRBV12-1-201ENST00000479785 344 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 AC011352.3-201ENST00000505162 593 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 SCARNA17.1-201ENST00000516211 143 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 SCARNA17.2-201ENST00000516334 143 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 AC013444.2-201ENST00000603317 787 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 AC013468.1-201ENST00000608680 598 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 SCARNA17.4-201ENST00000614296 143 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 AC084768.2-201ENST00000622736 221 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 AC073308.1-201ENST00000623696 305 ntBASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV30A0A087WSZ9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms