Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA3Q9Y5H0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU6-451P-201ENST00000362921 107 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 Y_RNA.157-201ENST00000363638 102 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 Y_RNA.381-201ENST00000365666 102 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU4-46P-201ENST00000410818 138 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AL139095.3-201ENST00000419672 1203 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AL109913.1-201ENST00000421173 514 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 NDUFB4P7-201ENST00000423198 363 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AL132765.1-201ENST00000434165 553 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 HLA-N-201ENST00000437516 135 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 FABP5P13-201ENST00000452144 328 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 CACYBPP2-201ENST00000453625 678 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 VN1R17P-201ENST00000472048 1090 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 RN7SL812P-201ENST00000493791 279 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC104806.1-201ENST00000508720 308 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 HIF1AP1-201ENST00000553642 175 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC067852.3-201ENST00000589177 561 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC002545.1-201ENST00000592511 181 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC011155.2-201ENST00000623202 216 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 AC009033.1-201ENST00000624279 431 ntBASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA3Q9Y5H0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 LARP1BP1-201ENST00000506036 1359 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 CASC19-280ENST00000642102 1351 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 RN7SKP280-201ENST00000364196 304 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 RNA5SP22-201ENST00000365393 109 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU6-190P-201ENST00000384154 102 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 SNORA48.7-201ENST00000391302 135 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 RNU6-193P-201ENST00000410977 107 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 OR9R1P-201ENST00000412200 877 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 ARL5AP1-201ENST00000418991 388 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 FTH1P6-201ENST00000430768 320 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 SNRPFP3-201ENST00000457792 225 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 RPS27AP17-201ENST00000463344 455 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 RPL21P129-201ENST00000491732 478 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 RN7SL691P-201ENST00000494487 301 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 SLC25A15P5-201ENST00000508033 253 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AC008958.1-201ENST00000511047 682 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AC007424.1-203ENST00000554613 687 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AL121579.1-201ENST00000555129 305 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AP001029.3-201ENST00000588063 596 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AL049634.3-201ENST00000604968 457 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AC034102.8-201ENST00000615146 484 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 AC008568.2-201ENST00000623862 2313 ntBASIC4.18□□□□□ -1.74
PCDHGA3Q9Y5H0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 AL158163.1-201ENST00000603915 1649 ntBASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 RPL7P26-201ENST00000333817 754 ntBASIC4.17□□□□□ -1.74
PCDHGA3Q9Y5H0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms