Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL078595.1-201ENST00000404458 226 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL356776.1-201ENST00000406574 447 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 HSPE1P8-201ENST00000406997 288 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 RPS12P24-201ENST00000412619 387 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 SRIP2-201ENST00000428470 166 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 RPL36AP53-201ENST00000432891 316 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL591212.2-201ENST00000433923 257 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 OR4C10P-201ENST00000434991 931 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 CBWD4P-201ENST00000445695 655 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 DHFRP3-201ENST00000455595 559 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL162395.1-201ENST00000457882 422 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 RPS4XP13-201ENST00000483219 789 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC041039.1-201ENST00000485656 536 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 RPS15AP34-201ENST00000487776 387 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL160314.1-201ENST00000490836 438 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC108475.1-201ENST00000507880 950 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 RNA5SP446-201ENST00000515955 82 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 RNU6-123P-201ENST00000516163 102 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 SUB1P1-201ENST00000524415 382 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 CENPUP1-201ENST00000526649 1202 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL121576.1-201ENST00000556055 276 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 RPL23AP87-202ENST00000573039 466 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC010525.2-201ENST00000590920 195 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 BNIP3P22-201ENST00000593399 556 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC007687.1-201ENST00000602704 304 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 DPPA3P3-201ENST00000603842 430 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL670379.4-201ENST00000605279 254 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 RMST_3.1-201ENST00000611651 109 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AL357559.1-201ENST00000622228 274 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC008725.1-201ENST00000605123 2263 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA9Q9Y5G4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 Y_RNA.160-201ENST00000363677 92 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 RN7SKP280-201ENST00000364196 304 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 RNU1-132P-201ENST00000364300 164 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 DEFB109C-201ENST00000382575 264 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 DEFB109B-201ENST00000382656 264 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 RNU6-550P-201ENST00000391057 101 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 RNA5SP111-201ENST00000411386 101 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 RPL30P16-201ENST00000419341 429 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AL121601.2-201ENST00000438019 707 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AL118520.1-201ENST00000450770 291 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 MTND3P16-201ENST00000452205 344 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC108022.1-201ENST00000493466 478 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC020593.1-201ENST00000507399 299 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 FTH1P9-201ENST00000513251 355 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC090151.1-201ENST00000520784 730 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC100770.1-201ENST00000532310 322 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 BNIP3P9-201ENST00000603714 553 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC022893.3-201ENST00000607665 437 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 uc_338.32-201ENST00000615087 172 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 MIR8059-201ENST00000620427 81 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC092794.2-201ENST00000620933 563 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC008785.1-201ENST00000624475 456 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC140479.6-201ENST00000633535 357 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC090740.1-201ENST00000623193 2262 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AL354685.2-201ENST00000448218 1447 ntBASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA9Q9Y5G4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA9Q9Y5G4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA9Q9Y5G4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA9Q9Y5G4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA9Q9Y5G4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms