Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HIGD1AP2-201ENST00000446367 280 ntBASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 RNU7-120P-201ENST00000459334 63 ntBASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 HSPE1P6-201ENST00000479457 291 ntBASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 RN7SL727P-201ENST00000482164 296 ntBASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 AC084851.1-201ENST00000529105 249 ntBASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 AC018809.2-201ENST00000602436 3823 ntBASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 AC132825.6-201ENST00000638861 357 ntBASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 AC026951.1-201ENST00000559530 2459 ntBASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB11Q9Y5F2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 SDAD1P2-201ENST00000441308 2028 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 RNU6-1167P-201ENST00000363227 94 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 Y_RNA.358-201ENST00000365491 99 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 SNORA51.8-201ENST00000384234 132 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 Y_RNA.541-201ENST00000384640 113 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 AL158156.1-201ENST00000422509 473 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 TMEM167AP1-201ENST00000423409 219 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 RPL23AP22-201ENST00000437556 453 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 AL359073.1-201ENST00000448036 403 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 RPL23AP45-201ENST00000476406 468 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 RPS4XP1-201ENST00000482189 787 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 RPS21P4-201ENST00000487122 248 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 AP002770.2-201ENST00000543613 532 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 AC012616.1-201ENST00000600294 197 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 RNF138P2-201ENST00000603490 592 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 AC083899.1-201ENST00000454465 3819 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 AC093671.1-201ENST00000624981 2929 ntBASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHB11Q9Y5F2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 ADAM24P-201ENST00000398655 2101 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC144833.1-201ENST00000567953 4089 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 MIR133A2-201ENST00000347538 102 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 RNU5A-1-201ENST00000362698 116 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 Y_RNA.143-201ENST00000363520 106 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 U3.6-201ENST00000363622 211 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 Y_RNA.291-201ENST00000364886 113 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 RNU6-125P-201ENST00000384505 107 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 SNORA12.2-201ENST00000391040 156 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC007161.1-204ENST00000423039 460 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 OR6D1P-201ENST00000436165 939 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC005532.2-201ENST00000467154 373 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 RN7SL188P-201ENST00000469842 285 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AP000797.2-201ENST00000475768 606 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 RPSAP50-201ENST00000481955 852 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 RN7SL447P-201ENST00000494711 245 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 SNORA25.14-201ENST00000516481 132 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 MIR2355-201ENST00000517199 87 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 HIGD1AP5-201ENST00000529959 259 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC010186.2-204ENST00000537668 439 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC103996.1-201ENST00000555468 102 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC022968.1-201ENST00000567372 442 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC104581.2-201ENST00000572227 430 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AL161798.1-201ENST00000604630 131 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 Y_RNA.772-201ENST00000606692 102 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 U2.14-201ENST00000615943 113 ntBASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHB11Q9Y5F2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms