Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-157P-201ENST00000383957 107 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-140P-201ENST00000384566 108 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 MIR181A2-201ENST00000384863 110 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 CCNG1P1-201ENST00000406783 885 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-193P-201ENST00000410977 107 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AL445669.1-201ENST00000426743 755 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 CYCSP32-201ENST00000440548 321 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AL358232.1-201ENST00000448030 501 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC008481.1-201ENST00000463278 396 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 RPS15AP36-201ENST00000492022 382 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 TBCAP3-201ENST00000512475 312 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC110760.3-202ENST00000515177 371 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 MTCO2P15-201ENST00000532655 656 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC128657.1-201ENST00000549459 145 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 DUXAP1-201ENST00000556632 463 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 MTND4P33-201ENST00000556706 766 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AL133153.1-201ENST00000557756 303 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC010546.1-201ENST00000569391 485 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC009163.5-201ENST00000575421 637 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 UBL5P2-201ENST00000583788 219 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AF038458.1-201ENST00000588406 262 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 BNIP3P39-201ENST00000601077 554 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 VN1R85P-201ENST00000601587 426 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AL035413.2-201ENST00000604801 525 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AL137843.1-201ENST00000605078 385 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC091953.5-201ENST00000622919 233 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 CR848007.1-201ENST00000442354 1699 ntBASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
KCNIP3Q9Y2W7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 FTLP6-201ENST00000355274 422 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 SNORA9.2-201ENST00000365361 133 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-723P-201ENST00000383973 107 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 MIR1305-201ENST00000408300 86 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 RNU2-25P-201ENST00000411041 191 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AL359704.1-201ENST00000411586 781 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 USP9YP26-201ENST00000421008 661 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 SUMO1P4-201ENST00000429430 302 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 GTF2IP20-201ENST00000431663 360 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC008155.2-201ENST00000464337 397 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 RN7SL385P-201ENST00000468873 276 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC106872.3-201ENST00000495104 446 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 OR2A20P-203ENST00000498397 1268 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC114786.4-201ENST00000508771 728 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 OR5BM1P-201ENST00000512021 366 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC114797.1-201ENST00000514003 728 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 HMGB1P41-201ENST00000520234 440 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 SUB1P1-201ENST00000524415 382 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 OR4R1P-201ENST00000529879 463 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AL049838.1-201ENST00000563647 981 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 VN1R92P-201ENST00000598511 928 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC024560.3-201ENST00000608482 349 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC072039.2-201ENST00000608883 439 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 FTX_3.1-201ENST00000610451 147 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 UCA1.1-201ENST00000620952 75 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AC103798.2-201ENST00000624292 632 ntBASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.39□□□□□ -2.03
KCNIP3Q9Y2W7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
KCNIP3Q9Y2W7 MIR26A1-201ENST00000362205 77 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms