Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.4□□□□□ -2.03
RIMBP3Q9UFD9 MIR5000-201ENST00000577717 103 ntBASIC2.4□□□□□ -2.03
RIMBP3Q9UFD9 AC245128.3-201ENST00000594721 748 ntBASIC2.4□□□□□ -2.03
RIMBP3Q9UFD9 HMGB1P51-201ENST00000605166 638 ntBASIC2.4□□□□□ -2.03
RIMBP3Q9UFD9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.4□□□□□ -2.03
RIMBP3Q9UFD9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
RIMBP3Q9UFD9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.4□□□□□ -2.03
RIMBP3Q9UFD9 AC135776.4-201ENST00000624300 1904 ntBASIC2.4□□□□□ -2.03
RIMBP3Q9UFD9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 MTCO1P48-201ENST00000448024 1096 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 AC025857.1-201ENST00000525252 377 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 SUB1P4-201ENST00000566062 339 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 SNRPGP15-201ENST00000600149 222 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 AL049779.4-201ENST00000604500 156 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 AC068944.2-201ENST00000610373 403 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 MIR6864-201ENST00000617935 70 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 FAM157B-203ENST00000639350 358 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 MTND4P31-201ENST00000425607 1343 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 RNA5SP257-201ENST00000363023 116 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 RNU6-405P-201ENST00000516637 110 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 RNU6-467P-201ENST00000517027 110 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 MIR3660-201ENST00000584845 100 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 ZNF92P3-201ENST00000596594 954 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 AC012150.2-201ENST00000621300 544 ntBASIC2.39□□□□□ -2.03
RIMBP3Q9UFD9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 SNORA7.2-201ENST00000364446 145 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 SNORA51.2-201ENST00000364595 132 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 RNU4-31P-201ENST00000384211 141 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 U3.40-201ENST00000408706 208 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 RPL17P12-201ENST00000413391 526 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 AL445305.1-201ENST00000432577 575 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 SNRPFP3-201ENST00000457792 225 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 AC021382.1-201ENST00000483523 359 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 MTCO3P44-201ENST00000510977 541 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 SULT1C2P1-202ENST00000562418 459 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 AL049838.1-201ENST00000563647 981 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 AC023825.1-201ENST00000566704 1030 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 AC090616.5-202ENST00000582111 297 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 AL121917.1-203ENST00000605534 577 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 AC104307.1-201ENST00000616142 196 ntBASIC2.38□□□□□ -2.03
RIMBP3Q9UFD9 RNU2-71P-201ENST00000411395 189 ntBASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 WARS2P1-201ENST00000429678 537 ntBASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 HMGN2P18-201ENST00000450680 270 ntBASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 AC084851.1-201ENST00000529105 249 ntBASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 AC008127.2-201ENST00000549925 1075 ntBASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 AC113368.1-201ENST00000603736 382 ntBASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 AL049737.1-201ENST00000413920 1403 ntBASIC2.37□□□□□ -2.03
RIMBP3Q9UFD9 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 RNU6-600P-201ENST00000362524 99 ntBASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 AL627224.1-201ENST00000448334 444 ntBASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 NCOR1P1-202ENST00000486162 291 ntBASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 KATNBL1P4-201ENST00000503545 918 ntBASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 AP000907.2-201ENST00000530827 353 ntBASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 NUP58P1-201ENST00000502546 1738 ntBASIC2.36□□□□□ -2.03
RIMBP3Q9UFD9 RNU6-386P-201ENST00000362650 107 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 MIR222-201ENST00000384992 110 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 MIR216A-201ENST00000385063 110 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 RNU2-21P-201ENST00000410368 188 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 EBAG9P1-201ENST00000418955 543 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 AL513343.1-201ENST00000451818 792 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 HMGN2P16-201ENST00000456802 261 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 DYNLL1P5-201ENST00000467158 270 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 AL049870.4-201ENST00000555741 486 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 AC024614.2-201ENST00000577584 372 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 NF1P3-201ENST00000457709 450 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 RPL21P104-201ENST00000464143 478 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 AC104472.2-201ENST00000469035 601 ntBASIC2.35□□□□□ -2.03
RIMBP3Q9UFD9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms