Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 SNORA69-201ENST00000383895 132 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 SNORD51-201ENST00000384320 80 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 RNU2-62P-201ENST00000410868 191 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 RPL7P2-201ENST00000427639 268 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AL606489.2-201ENST00000433886 234 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC016691.1-201ENST00000441321 413 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 TPT1P14-201ENST00000448018 505 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 HMGB3P22-202ENST00000451823 572 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC092001.1-201ENST00000453012 261 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 RPS20P24-201ENST00000457473 361 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 RPL39P36-201ENST00000490784 156 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AL139099.1-201ENST00000497398 403 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC017037.1-201ENST00000508460 471 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 MTND3P22-201ENST00000510932 243 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 LRRC34P2-201ENST00000514850 553 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 RNU6-410P-201ENST00000517006 107 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 RNU6-1220P-201ENST00000517126 108 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC091516.1-201ENST00000549191 703 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 HIF1AP1-201ENST00000553642 175 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC034105.3-201ENST00000565294 442 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC087045.1-201ENST00000605856 382 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 MIR6868-201ENST00000611215 58 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AC002550.2-201ENST00000621246 394 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AL159972.1-201ENST00000625150 448 ntBASIC4.07□□□□□ -1.76
DKK3Q9UBP4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.07□□□□□ -1.76
DKK3Q9UBP4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC032011.1-201ENST00000611703 1549 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 ZNF680P1-201ENST00000436625 1469 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 RNU6-600P-201ENST00000362524 99 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 RNU5A-8P-201ENST00000364102 114 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 Y_RNA.813-201ENST00000364639 102 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 Y_RNA.548-201ENST00000384656 105 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 MIR19A-201ENST00000384878 82 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 RNU6ATAC-201ENST00000408749 126 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 CYCSP43-201ENST00000438233 310 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AL590399.6-201ENST00000446396 307 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AL356010.1-201ENST00000456364 102 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 snoU109.4-201ENST00000458953 143 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 MTCO3P44-201ENST00000510977 541 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC021146.1-201ENST00000511202 716 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 RNU6-1231P-201ENST00000517185 103 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 MIR4286-201ENST00000580651 93 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC053481.4-201ENST00000583164 216 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC105224.1-201ENST00000587055 421 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC098848.2-201ENST00000588023 330 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 YWHAQP7-201ENST00000603536 658 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC112230.1-201ENST00000604342 547 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC245517.5-201ENST00000611529 162 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 RMST_3.1-201ENST00000611651 109 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 DISC2.1-201ENST00000612827 205 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC092628.2-201ENST00000622492 339 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC093648.1-201ENST00000623546 606 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 AC091925.2-201ENST00000625059 256 ntBASIC4.06□□□□□ -1.76
DKK3Q9UBP4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DKK3Q9UBP4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms