Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC004925.1-201ENST00000624256 2706 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 Y_RNA.89-201ENST00000363031 102 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 RNU6-335P-201ENST00000364563 113 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 Y_RNA.295-201ENST00000364918 102 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 RNA5SP235-201ENST00000365411 114 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 RNU6-877P-201ENST00000383868 107 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 RNU6-39P-201ENST00000384344 107 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 MIR558-201ENST00000384920 94 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 RNU6-882P-201ENST00000391025 103 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AL136372.1-201ENST00000403060 228 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 RNU2-9P-201ENST00000410194 145 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC008481.1-201ENST00000463278 396 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 RPS27AP1-201ENST00000475545 471 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 RPL36AP51-201ENST00000487216 318 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC100870.1-201ENST00000522035 505 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC123904.3-201ENST00000547218 814 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC125611.2-201ENST00000551907 647 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC012182.1-201ENST00000570133 895 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC069234.5-201ENST00000611056 416 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AL591424.2-201ENST00000617023 128 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AC091953.5-201ENST00000622919 233 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AL008636.1-201ENST00000625038 1018 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 ZNF680P1-201ENST00000436625 1469 ntBASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
DNMT3BQ9UBC3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
DNMT3BQ9UBC3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AC073343.1-201ENST00000328239 651 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 RNU6-534P-201ENST00000364877 106 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 PTMAP5-201ENST00000393073 333 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 SOD2P1-201ENST00000396543 562 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 RPS3AP24-201ENST00000407896 734 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AMD1P2-201ENST00000412936 992 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 USP9YP6-201ENST00000413550 854 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 RWDD4P2-201ENST00000426392 563 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 OR2AS1P-201ENST00000427827 319 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 MTCO3P18-201ENST00000440206 761 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 MTCO3P45-201ENST00000443036 613 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 SNRPGP6-201ENST00000451124 220 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AC083798.1-201ENST00000472671 131 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 HMGB1P41-201ENST00000520234 440 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AC118273.2-201ENST00000532092 465 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 MIR4293-201ENST00000584305 78 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 SNRPGP15-201ENST00000600149 222 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 NRBF2P5-201ENST00000603087 788 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 SNHG22-203ENST00000617833 660 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 AC119674.1-207ENST00000641355 633 ntBASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.96□□□□□ -1.78
DNMT3BQ9UBC3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms