Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 RPL17P50-201ENST00000396131 546 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AP000567.1-201ENST00000406413 156 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 SNORA11-201ENST00000408789 128 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 RNA5SP44-201ENST00000410446 133 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 RNU2-47P-201ENST00000410649 186 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 MTND1P21-201ENST00000412991 285 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC092447.6-201ENST00000414578 210 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 EI24P1-201ENST00000416584 867 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC019097.1-201ENST00000424783 735 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 RPL31P35-201ENST00000431058 377 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 ATP5JP1-201ENST00000431631 322 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 GOT2P5-201ENST00000433995 546 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC104850.1-201ENST00000435940 476 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 SETP5-201ENST00000437270 562 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 FTH1P1-201ENST00000437933 532 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 MTCO2P3-201ENST00000442543 421 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 Z95327.1-201ENST00000446082 482 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC115115.1-201ENST00000449927 248 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 RPL23AP67-201ENST00000465341 474 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC004924.1-201ENST00000480160 781 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC108078.1-201ENST00000508073 725 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 SAP18P1-201ENST00000512058 390 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 RNU6-718P-201ENST00000516166 105 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC107934.1-201ENST00000522215 217 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AP000907.2-201ENST00000530827 353 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 MIR3118-1-201ENST00000581787 76 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 DUXAP4-201ENST00000603046 613 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC055876.5-201ENST00000605667 259 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC136475.10-201ENST00000620253 385 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC091953.2-201ENST00000623979 160 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC124864.2-201ENST00000624736 186 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 LRRC77P-213ENST00000637727 880 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 MFSD8-233ENST00000641482 4860 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 AC093536.2-201ENST00000565257 1406 ntBASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.5□□□□□ -1.85
SMARCAL1Q9NZC9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 FRG1BP-201ENST00000278882 761 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 SNORA62.3-201ENST00000365110 153 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 SNORD51-201ENST00000384320 80 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 RNU6-114P-201ENST00000384704 105 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 GSTA9P-201ENST00000406231 611 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 RNA5SP56-201ENST00000410277 118 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 SYF2P2-201ENST00000417620 583 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 RPL21P112-201ENST00000434403 463 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 UBE2V1P8-201ENST00000437166 265 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AL049734.2-201ENST00000441066 616 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC112653.1-201ENST00000443851 386 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AL590399.6-201ENST00000446396 307 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 RBM43P1-201ENST00000476891 1081 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 CCNG2P1-201ENST00000549521 1000 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AL356432.3-201ENST00000568952 465 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AL669831.4-202ENST00000590817 238 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC006254.3-201ENST00000603353 884 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AP000860.1-201ENST00000605250 559 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC112204.3-201ENST00000623822 332 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 CR381653.2-201ENST00000624041 768 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 MIR6863-201ENST00000636112 90 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC012442.3-202ENST00000636742 206 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC009093.8-201ENST00000641769 292 ntBASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AC007256.1-201ENST00000392253 2765 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms