Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 HIGD1AP5-201ENST00000529959 259 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 RANP3-201ENST00000530970 276 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC015917.1-201ENST00000579654 510 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC128687.2-201ENST00000609657 566 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC090510.2-201ENST00000617465 629 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 uc_338.13-201ENST00000618243 179 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC079684.1-201ENST00000621405 437 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 AC048347.1-201ENST00000624621 427 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 ASNSP3-201ENST00000451989 1306 ntBASIC4.19□□□□□ -1.74
MKS1Q9NXB0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MKS1Q9NXB0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 RNU6-867P-201ENST00000364956 107 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 SNORD37.1-201ENST00000390968 65 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AL133270.1-201ENST00000402635 279 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 RNU6-193P-201ENST00000410977 107 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 RNU6-373P-201ENST00000411247 98 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 RPL30P2-201ENST00000414021 291 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 RPL7P46-201ENST00000425129 740 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 HMGB1P27-201ENST00000431429 603 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 RPL36AP53-201ENST00000432891 316 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AF228730.2-201ENST00000438784 848 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 RPS3AP41-201ENST00000462701 778 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC010326.1-201ENST00000462726 602 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AL049830.2-201ENST00000480072 201 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC018710.1-201ENST00000506509 158 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 RNU4-29P-201ENST00000515943 174 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 Y_RNA.689-201ENST00000516589 107 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 RN7SKP289-201ENST00000517244 295 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 OR5D15P-201ENST00000531671 942 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 ADI1P3-201ENST00000549509 470 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AL121576.1-201ENST00000556055 276 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 MIR3934-201ENST00000579806 107 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC069061.3-201ENST00000582254 823 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC010525.2-201ENST00000590920 195 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC002545.1-201ENST00000592511 181 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC106900.2-201ENST00000604994 317 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 HMGB1P50-201ENST00000605814 607 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC034102.8-201ENST00000615146 484 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AP003122.6-201ENST00000623831 495 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 AC009033.1-201ENST00000624279 431 ntBASIC4.18□□□□□ -1.74
MKS1Q9NXB0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MKS1Q9NXB0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
MKS1Q9NXB0 OR4G1P-203ENST00000641984 1631 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AF127577.6-201ENST00000623352 2191 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
MKS1Q9NXB0 OR56B2P-202ENST00000641377 2453 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.17□□□□□ -1.74
MKS1Q9NXB0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
MKS1Q9NXB0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MKS1Q9NXB0 RNU6-50P-201ENST00000362356 103 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 SNORA72.1-201ENST00000363485 129 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 RNU6-288P-201ENST00000363690 104 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 RNU6-550P-201ENST00000391057 101 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AL356776.1-201ENST00000406574 447 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 RNA5SP129-201ENST00000410276 118 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 OR6C66P-201ENST00000414917 930 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AC092809.3-201ENST00000415453 231 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AL157831.1-201ENST00000426134 473 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AC091390.3-201ENST00000426478 338 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AL356535.1-201ENST00000440335 398 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 MTND4P25-201ENST00000441039 533 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.17□□□□□ -1.74
MKS1Q9NXB0 PRDX3P3-201ENST00000447765 522 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 SNRPFP3-201ENST00000457792 225 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AC087588.1-201ENST00000462203 316 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 RN7SL610P-201ENST00000463845 291 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 RPL31P60-201ENST00000478450 367 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AC041039.1-201ENST00000485656 536 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 RNU6-1256P-201ENST00000516539 103 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 RNA5SP468-201ENST00000516782 93 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.17□□□□□ -1.74
MKS1Q9NXB0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AC104662.1-201ENST00000604448 511 ntBASIC4.17□□□□□ -1.74
MKS1Q9NXB0 AC113403.1-201ENST00000604910 193 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms