Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RNU6-1287P-201ENST00000362914 107 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 Y_RNA.89-201ENST00000363031 102 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RNU6-1060P-201ENST00000384664 107 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 MIR3074-201ENST00000384885 81 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RNU6-908P-201ENST00000410160 94 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RNU2-33P-201ENST00000410344 192 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RNU6-387P-201ENST00000411331 105 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 SNRPFP1-201ENST00000414761 252 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC000111.3-201ENST00000433478 193 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 SNORA71B-202ENST00000439232 272 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 SEPT14P3-201ENST00000439401 183 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AL732372.2-207ENST00000445840 183 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AL118520.1-201ENST00000450770 291 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 SEPT14P2-201ENST00000453405 183 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 DHFRP3-201ENST00000455595 559 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RPL23AP24-201ENST00000458203 385 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RNA5SP310-201ENST00000459084 116 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RN7SL459P-201ENST00000481078 302 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AL160314.1-201ENST00000490836 438 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RPL30P5-201ENST00000494923 336 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 CEACAMP10-202ENST00000495431 496 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC025554.1-201ENST00000505641 188 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC098591.2-201ENST00000510152 315 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 SEPT14P4-201ENST00000513445 186 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 APOOP4-201ENST00000513530 597 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RNA5SP291-201ENST00000517222 105 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 IGLVIV-65-201ENST00000517313 360 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 FO082796.1-201ENST00000523795 183 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 ATP5F1P5-201ENST00000526403 760 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RANP3-201ENST00000530970 276 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC009643.1-201ENST00000532030 391 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 TRAV28-201ENST00000557548 323 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 SNORA59B-202ENST00000578183 701 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 MIR4801-201ENST00000582704 82 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC053481.4-201ENST00000583164 216 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC006504.3-201ENST00000586818 523 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 BNIP3P30-201ENST00000601184 574 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC068790.4-201ENST00000602474 263 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AL161798.1-201ENST00000604630 131 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC104458.1-201ENST00000608243 463 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 uc_338.13-201ENST00000618243 179 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AC007546.1-201ENST00000619452 559 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 MIR4727-201ENST00000622232 55 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 FER-210ENST00000628534 558 ntTSL 5 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 CKAP2P1-201ENST00000555477 2049 ntBASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LIN7CQ9NUP9 LINC02471-203ENST00000641941 4752 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 RNU1-32P-201ENST00000363937 159 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 RNU6-534P-201ENST00000364877 106 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 Y_RNA.295-201ENST00000364918 102 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 Y_RNA.573-201ENST00000384763 105 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 CISD1P1-201ENST00000393907 327 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 RNA5SP111-201ENST00000411386 101 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 FAR2P2-201ENST00000413041 594 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC068533.1-201ENST00000418542 415 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 TMEM167AP1-201ENST00000423409 219 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AF228730.2-201ENST00000438784 848 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 PHBP16-201ENST00000446318 950 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 RN7SL98P-201ENST00000462271 300 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 RN7SL481P-201ENST00000477764 299 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC117522.3-201ENST00000507974 584 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 PCBP2P3-201ENST00000509726 843 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC093840.1-201ENST00000511599 336 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 RNU6-685P-201ENST00000517088 95 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 RNA5SP290-201ENST00000517133 127 ntBASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.5□□□□□ -1.85
LIN7CQ9NUP9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms