Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC009961.2-201ENST00000435771 251 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 RAC1P7-201ENST00000445367 377 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 SNORD121B-201ENST00000458838 81 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 snoU13.3-201ENST00000459441 104 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 VN1R17P-201ENST00000472048 1090 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 RN7SKP244-201ENST00000516513 307 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 RNU6-798P-201ENST00000516912 103 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 MIR3118-1-201ENST00000581787 76 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 DUXAP4-201ENST00000603046 613 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC107304.1-201ENST00000604229 296 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AL161734.1-201ENST00000609720 557 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AL133173.2-201ENST00000614270 90 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC009268.2-201ENST00000621925 457 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AL356585.4-201ENST00000623078 1229 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC091953.2-201ENST00000623979 160 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 PISRT1-201ENST00000626175 531 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC073476.4-201ENST00000628409 72 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 SEPT14P19-203ENST00000633205 211 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 LRRC77P-213ENST00000637727 880 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 AC009902.3-201ENST00000606235 2172 ntBASIC3.48□□□□□ -1.85
PCDH9Q9HC56 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PCDH9Q9HC56 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 RNY4P16-201ENST00000364768 94 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 RNU6-805P-201ENST00000365643 106 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 RNU6-837P-201ENST00000391056 108 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AL583834.1-201ENST00000406943 343 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 RPS15AP12-201ENST00000419498 388 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AC245291.1-201ENST00000419501 328 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 FTH1P1-201ENST00000437933 532 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AL049734.2-201ENST00000441066 616 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 USP9YP15-201ENST00000442391 422 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AC234775.1-201ENST00000454247 670 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AL117351.2-201ENST00000513571 157 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 RNU6-528P-201ENST00000516926 100 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AC107934.1-201ENST00000522215 217 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AL133271.1-201ENST00000538229 291 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AC027807.1-201ENST00000559921 996 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 BX664608.1-201ENST00000610519 487 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 SNORD39.4-201ENST00000620099 78 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 MTCO1P9-201ENST00000505577 1534 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AL356274.2-201ENST00000624379 3752 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AC005183.1-201ENST00000603687 1979 ntBASIC3.47□□□□□ -1.85
PCDH9Q9HC56 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDH9Q9HC56 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 Y_RNA.6-201ENST00000362350 114 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 RNA5SP197-201ENST00000363357 119 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 RNU6-1078P-201ENST00000364522 103 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 Y_RNA.296-201ENST00000364930 108 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 SNORA48.7-201ENST00000391302 135 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 RNA5SP293-201ENST00000410527 113 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 UBE2V1P10-201ENST00000414685 269 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 RPS15AP6-201ENST00000420703 385 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC233728.2-201ENST00000425348 757 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 RPL31P35-201ENST00000431058 377 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 FCF1P1-201ENST00000432690 571 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC119618.1-201ENST00000434191 222 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 MTND1P4-201ENST00000435196 415 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC104850.1-201ENST00000435940 476 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 RPL23AP22-201ENST00000437556 453 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms