Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.153-201ENST00000363615 91 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.574-201ENST00000384766 95 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 RNA5SP372-201ENST00000390836 115 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AL139039.1-201ENST00000401900 692 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 Z98745.1-201ENST00000402553 494 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 LAP3P1-201ENST00000403648 294 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AC080125.1-201ENST00000414888 684 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 ATG3P1-201ENST00000419507 911 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 H2AFZP6-201ENST00000444403 394 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 GEMIN8P3-201ENST00000445417 720 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 BX276092.4-201ENST00000452056 248 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 RN7SL354P-201ENST00000469282 294 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AC117503.1-201ENST00000472241 394 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AC087385.1-201ENST00000475062 312 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 RN7SL817P-201ENST00000480777 288 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AP001086.1-201ENST00000494882 321 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-264P-201ENST00000517134 104 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 RNU1-54P-201ENST00000517181 120 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-323P-201ENST00000521915 107 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 MIR3941-201ENST00000582572 103 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AL138889.2-201ENST00000603883 242 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AC104695.3-201ENST00000604052 296 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AC018889.1-201ENST00000605372 397 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AC009570.1-201ENST00000609599 745 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 AL161616.1-201ENST00000611867 286 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.14□□□□□ -1.75
SEC61A2Q9H9S3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-1284P-201ENST00000363701 100 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RNA5SP505-201ENST00000364748 108 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.455-201ENST00000384230 98 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-393P-201ENST00000384475 107 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-306P-201ENST00000384617 107 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 SNORD96B-201ENST00000386148 79 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-754P-201ENST00000391166 107 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 SNORA75.6-201ENST00000391318 127 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AL445189.1-201ENST00000405722 338 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 HDGFP1-201ENST00000405943 252 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RN7SKP267-201ENST00000410381 285 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC092447.6-201ENST00000414578 210 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 BX510359.2-201ENST00000417920 305 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 EIF4EP1-201ENST00000422311 642 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RPL7P37-201ENST00000425095 738 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 FAR2P4-202ENST00000425399 584 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 CALM2P2-201ENST00000428512 440 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 HIGD1AP11-201ENST00000438361 280 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC234775.1-201ENST00000454247 670 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RPS29P33-201ENST00000456717 146 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 U8.20-201ENST00000459445 131 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RPL5P30-201ENST00000465511 891 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RPS27AP1-201ENST00000475545 471 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC007686.1-201ENST00000488511 463 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC110794.1-201ENST00000505816 425 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-470P-201ENST00000515954 104 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 SNORA14.1-201ENST00000516113 141 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-1069P-201ENST00000516612 133 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 RN7SKP277-201ENST00000516895 283 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC087854.1-201ENST00000519706 414 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 CR383656.7-201ENST00000548164 174 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC105129.1-201ENST00000560250 297 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 MYL12BP1-201ENST00000569826 507 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC018462.2-201ENST00000605375 395 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 432.3 ms