Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AL096701.2-201ENST00000416920 238 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 RPL23AP76-201ENST00000441860 458 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC021382.1-201ENST00000483523 359 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC104629.1-201ENST00000494226 508 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC022447.3-201ENST00000506865 495 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC114786.4-201ENST00000508771 728 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC008837.2-201ENST00000513076 418 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC114797.1-201ENST00000514003 728 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 RNA5SP471-201ENST00000516971 106 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 MTND1P36-201ENST00000522384 936 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 COX6CP8-201ENST00000522620 226 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 SUB1P1-201ENST00000524415 382 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC004486.1-201ENST00000546846 233 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC079600.2-201ENST00000550076 130 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AC034102.8-201ENST00000615146 484 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 AL138713.1-201ENST00000624026 2130 ntBASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LRRC40Q9H9A6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 Y_RNA.333-201ENST00000365274 102 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 RNU6-140P-201ENST00000384566 108 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 RNU6-114P-201ENST00000384704 105 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 RN7SKP140-201ENST00000411196 284 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AL449283.1-202ENST00000418249 604 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AC105272.1-201ENST00000438604 198 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 MTCO2P25-201ENST00000447065 681 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 MTND1P9-201ENST00000453775 944 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 MRPS17P3-201ENST00000465453 385 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 NRON-201ENST00000517270 370 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 HMGN1P28-201ENST00000521340 364 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AC100870.1-201ENST00000522035 505 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 DEFB131D-201ENST00000526803 184 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AP003497.1-201ENST00000528472 562 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 MIR3117-201ENST00000584034 78 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AL606834.3-201ENST00000602615 496 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 MTND4LP5-201ENST00000605152 292 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AC009268.2-201ENST00000621925 457 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AC019226.1-201ENST00000625666 515 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AL137790.1-201ENST00000634283 177 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 MTND1P37-201ENST00000636562 264 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 ZNF833P-201ENST00000424938 1494 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AL390862.1-201ENST00000635467 1469 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 AC135776.4-201ENST00000624300 1904 ntBASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.68□□□□□ -1.98
LRRC40Q9H9A6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 GNG5P1-201ENST00000255500 204 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 FTLP6-201ENST00000355274 422 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AL356421.1-201ENST00000403255 413 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AL139095.1-201ENST00000404326 391 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 RNU2-33P-201ENST00000410344 192 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AC107083.1-201ENST00000439643 279 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AL445687.1-201ENST00000439946 251 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AP000705.1-201ENST00000454567 350 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 snoU13.22-201ENST00000459428 104 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 RPS20P22-201ENST00000473700 357 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 RNU6-276P-201ENST00000516114 96 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 SNORA19.3-201ENST00000516165 130 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 ATP5F1P5-201ENST00000526403 760 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 MIR3670-2-201ENST00000582974 65 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 MIR3670-1-201ENST00000584160 65 ntBASIC2.67□□□□□ -1.98
LRRC40Q9H9A6 MIR3670-3-201ENST00000584855 65 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms