Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.72□□□□□ -1.81
CDT1Q9H211 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
CDT1Q9H211 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.71□□□□□ -1.81
CDT1Q9H211 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDT1Q9H211 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDT1Q9H211 AC009902.3-201ENST00000606235 2172 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 U8.3-201ENST00000363321 132 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 RNY4P34-201ENST00000364779 95 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.71□□□□□ -1.82
CDT1Q9H211 RNU6-114P-201ENST00000384704 105 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 RNU6-837P-201ENST00000391056 108 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDT1Q9H211 EI24P1-201ENST00000416584 867 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 USP9YP36-201ENST00000424581 829 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AC002075.2-201ENST00000425207 252 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AL589872.1-201ENST00000426602 288 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 ISCA1P1-201ENST00000426679 387 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 MTCO2P19-201ENST00000427513 598 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AC017083.1-201ENST00000428093 483 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.71□□□□□ -1.82
CDT1Q9H211 AC009961.2-201ENST00000435771 251 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AL451074.3-201ENST00000437709 472 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AL357552.1-201ENST00000445254 415 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.71□□□□□ -1.82
CDT1Q9H211 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 RPL21P13-201ENST00000488305 481 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 FCF1P3-201ENST00000496394 590 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AC068305.1-201ENST00000497406 726 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.71□□□□□ -1.82
CDT1Q9H211 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.71□□□□□ -1.82
CDT1Q9H211 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CDT1Q9H211 SNORA70.14-201ENST00000516205 110 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.71□□□□□ -1.82
CDT1Q9H211 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDT1Q9H211 AC011611.1-201ENST00000552179 197 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AC005476.1-201ENST00000554427 397 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.71□□□□□ -1.82
CDT1Q9H211 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.71□□□□□ -1.82
CDT1Q9H211 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.71□□□□□ -1.82
CDT1Q9H211 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.71□□□□□ -1.82
CDT1Q9H211 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.71□□□□□ -1.82
CDT1Q9H211 CKS1BP3-201ENST00000600888 237 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AP000907.4-201ENST00000604143 237 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AL161756.2-201ENST00000604597 246 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AP000860.1-201ENST00000605250 559 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 U6.42-201ENST00000618440 107 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.71□□□□□ -1.82
CDT1Q9H211 AL356585.4-201ENST00000623078 1229 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AC110994.2-201ENST00000635481 492 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 AC010149.2-201ENST00000637608 315 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 GABPAP-201ENST00000419271 1356 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.71□□□□□ -1.82
CDT1Q9H211 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CDT1Q9H211 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.71□□□□□ -1.82
CDT1Q9H211 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDT1Q9H211 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDT1Q9H211 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDT1Q9H211 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.71□□□□□ -1.82
CDT1Q9H211 AC244517.1-201ENST00000606030 2086 ntBASIC3.71□□□□□ -1.82
CDT1Q9H211 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDT1Q9H211 AC011460.1-201ENST00000636268 1834 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.7□□□□□ -1.82
CDT1Q9H211 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.7□□□□□ -1.82
CDT1Q9H211 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDT1Q9H211 OR5J1P-201ENST00000313544 939 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDT1Q9H211 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDT1Q9H211 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDT1Q9H211 MIR1183-201ENST00000408856 89 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 RNU6-712P-201ENST00000410558 100 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 Z99755.1-201ENST00000414048 380 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 C1DP2-201ENST00000418167 426 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AL353777.1-201ENST00000425552 326 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.7□□□□□ -1.82
CDT1Q9H211 AC005300.1-201ENST00000428401 373 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC073464.1-201ENST00000429823 534 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.7□□□□□ -1.82
CDT1Q9H211 AL049734.2-201ENST00000441066 616 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 NFU1P2-201ENST00000448700 469 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.7□□□□□ -1.82
CDT1Q9H211 AC055855.1-201ENST00000489563 579 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC108078.1-201ENST00000508073 725 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDT1Q9H211 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.7□□□□□ -1.82
CDT1Q9H211 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.7□□□□□ -1.82
CDT1Q9H211 AC126177.3-201ENST00000551839 688 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 SETP2-201ENST00000553886 926 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 ZNF519P2-201ENST00000557032 169 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.7□□□□□ -1.82
CDT1Q9H211 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.7□□□□□ -1.82
CDT1Q9H211 AC068790.5-201ENST00000602741 355 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC006557.5-201ENST00000603126 811 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC011451.2-201ENST00000604303 598 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AL031176.1-201ENST00000604554 466 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 RNU6-87P-201ENST00000607561 108 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.7□□□□□ -1.82
CDT1Q9H211 AC004067.1-201ENST00000608733 700 ntBASIC3.7□□□□□ -1.82
CDT1Q9H211 AC091304.9-201ENST00000612091 226 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms