Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 MIR3611-201ENST00000584484 83 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AP001429.1-201ENST00000602568 530 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC015871.2-201ENST00000603605 948 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 SEPT7P9-203ENST00000604116 343 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AL022099.1-201ENST00000604551 712 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC087752.4-201ENST00000605911 462 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AC108747.1-201ENST00000609508 535 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 AL590240.3-201ENST00000621416 943 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 LRRC77P-213ENST00000637727 880 ntBASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HOXD1Q9GZZ0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
HOXD1Q9GZZ0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
HOXD1Q9GZZ0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 RNA5SP119-201ENST00000362715 117 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 RNY4P24-201ENST00000362735 96 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 SNORA7.2-201ENST00000364446 145 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 RNU4-75P-201ENST00000364621 146 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 RNU4-91P-201ENST00000364778 135 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 RNU6-297P-201ENST00000384636 107 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 SNORA26.7-201ENST00000391288 122 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 MORF4L1P6-201ENST00000418771 268 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AL031667.1-201ENST00000440222 725 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AL049734.2-201ENST00000441066 616 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 MTCO2P7-201ENST00000446518 666 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 RAP1BP2-201ENST00000478270 544 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 RN7SL499P-201ENST00000481141 276 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC110794.1-201ENST00000505816 425 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 KLHL2P1-201ENST00000508691 521 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC079140.3-201ENST00000511111 550 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 RN7SKP244-201ENST00000516513 307 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC022616.6-201ENST00000520479 119 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AP003181.2-201ENST00000528941 181 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AP003122.4-201ENST00000530980 758 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AP002453.2-201ENST00000533503 320 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC007458.1-201ENST00000542812 373 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 SETP2-201ENST00000553886 926 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC009977.1-201ENST00000586015 570 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 BNIP3P8-201ENST00000597863 560 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC069234.5-201ENST00000611056 416 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC138749.5-201ENST00000611461 208 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC008250.2-201ENST00000615261 205 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC116165.2-201ENST00000616705 206 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC009159.1-201ENST00000618386 642 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC139792.2-201ENST00000624218 587 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AL159972.1-201ENST00000625150 448 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AC068137.4-201ENST00000638485 296 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AP001350.1-201ENST00000601906 1524 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 TEX21P-201ENST00000447107 1476 ntBASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
HOXD1Q9GZZ0 AL353743.1-202ENST00000431724 1695 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 SNORA75-201ENST00000384158 137 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 MIR7-3-201ENST00000384898 110 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 RNU6-882P-201ENST00000391025 103 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 DEFB108C-201ENST00000400154 252 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 MIR887-201ENST00000401258 79 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 RNU2-43P-201ENST00000410306 190 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 CCDC58P2-201ENST00000417131 366 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 AC069157.1-201ENST00000421749 137 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 AC233728.2-201ENST00000425348 757 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 RPL21P66-201ENST00000426566 466 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 OR2AS1P-201ENST00000427827 319 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 RPL17P49-201ENST00000443728 411 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 VN1R34P-201ENST00000447387 883 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 AL592447.1-201ENST00000447592 540 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 ELOCP23-201ENST00000452014 332 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 RPL31P13-201ENST00000484151 370 ntBASIC3.01□□□□□ -1.93
HOXD1Q9GZZ0 RPL7P23-201ENST00000493874 747 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms