Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC103810.1-201ENST00000579873 453 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC069431.2-201ENST00000604149 1099 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AC109809.1-201ENST00000619665 545 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 UCA1.1-201ENST00000620952 75 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 AL138713.1-201ENST00000624026 2130 ntBASIC2.18□□□□□ -2.06
SLIRPQ9GZT3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 DDX10P1-201ENST00000448545 1933 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 SNORA51.11-201ENST00000384442 131 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 SNORA41-201ENST00000384675 132 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 RNU6-114P-201ENST00000384704 105 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 PTMAP2-201ENST00000397627 327 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 VN1R51P-201ENST00000411675 945 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 MTCYBP38-201ENST00000417160 1123 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 COX7BP2-201ENST00000437976 242 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 DDX3P2-201ENST00000446138 111 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AL513328.1-201ENST00000446460 224 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 MTND1P16-201ENST00000465177 898 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 RPS20P22-201ENST00000473700 357 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AC104435.1-201ENST00000483483 166 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 HMGB1P36-201ENST00000487709 576 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 SEM1P1-201ENST00000506694 209 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AC024589.1-201ENST00000512207 263 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AC243972.3-201ENST00000539655 198 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 MIR5194-201ENST00000582634 120 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AC107075.1-201ENST00000613695 314 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 MTND1P37-201ENST00000636562 264 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
SLIRPQ9GZT3 AC000403.1-201ENST00000613696 3585 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 RNU6-744P-201ENST00000365557 107 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 RNU6-1316P-201ENST00000384242 108 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 MIR767-201ENST00000390228 109 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AL590084.2-201ENST00000401481 382 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 RNU2-33P-201ENST00000410344 192 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 RN7SKP140-201ENST00000411196 284 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 HMGB3P2-201ENST00000411913 584 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 RPS3AP37-201ENST00000419176 745 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 GTF2IP20-201ENST00000431663 360 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AL159987.2-201ENST00000432754 307 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 CYCSP32-201ENST00000440548 321 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 FGF7P5-201ENST00000441829 291 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 USP9YP10-201ENST00000454868 628 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 MEMO1P3-201ENST00000459811 302 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC135721.1-201ENST00000497954 479 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 GZMAP1-201ENST00000503054 631 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC138853.1-201ENST00000503549 823 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 WBP1LP4-201ENST00000505043 344 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC021146.8-201ENST00000507455 733 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC113155.1-201ENST00000511141 769 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC109445.1-201ENST00000512356 383 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 RNU6-840P-201ENST00000517275 65 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 CCNG2P1-201ENST00000549521 1000 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC121758.2-201ENST00000553271 193 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AL391261.3-201ENST00000557194 520 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC061975.8-201ENST00000587058 721 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC131235.4-201ENST00000609288 620 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC019226.1-201ENST00000625666 515 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 AC099654.8-201ENST00000637757 681 ntBASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.16□□□□□ -2.06
SLIRPQ9GZT3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SLIRPQ9GZT3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SLIRPQ9GZT3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.15□□□□□ -2.06
SLIRPQ9GZT3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms