Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CASP1P1-201ENST00000526345 212 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 TRAV11-201ENST00000539512 339 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC002487.1-201ENST00000604565 994 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC112503.2-201ENST00000609005 552 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 MIR219B-201ENST00000637023 88 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 WWP1P1-201ENST00000466609 2769 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 MIR337-201ENST00000362281 93 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 RNA5SP37-201ENST00000365420 130 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 RNA5SP354-201ENST00000391247 136 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 SNORA11.4-201ENST00000408823 129 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 RPL7L1P10-201ENST00000427790 463 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 AC012497.1-201ENST00000429392 575 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 AL592045.1-201ENST00000429867 352 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 MTCO3P11-201ENST00000455103 774 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 AC087588.1-201ENST00000462203 316 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 RPL31P41-201ENST00000477967 372 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 RPS27P26-201ENST00000494583 239 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 AC025768.1-201ENST00000510057 267 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 RNU6-295P-201ENST00000516901 104 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 AL022099.1-201ENST00000604551 712 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 MIR6840-201ENST00000611937 71 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 AL162233.1-201ENST00000620014 944 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 AC091925.2-201ENST00000625059 256 ntBASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
UPF3BQ9BZI7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
UPF3BQ9BZI7 GDI2P1-201ENST00000429312 1336 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 SNORA68.1-201ENST00000364537 132 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 GSTA9P-201ENST00000406231 611 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 RNU6-1140P-201ENST00000410517 106 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AL353729.1-201ENST00000425044 720 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 MTCO3P30-201ENST00000426425 670 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC090774.1-201ENST00000435925 246 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AL714022.1-201ENST00000439897 151 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 RPS26P30-201ENST00000443431 335 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC007677.1-201ENST00000445757 515 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AL929288.2-201ENST00000446368 407 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC025033.1-201ENST00000463883 194 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC104164.3-201ENST00000467363 1258 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC116337.2-201ENST00000477662 156 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC114322.1-201ENST00000506771 926 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AL359273.1-201ENST00000510918 627 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC113155.1-201ENST00000511141 769 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 RNU6-416P-201ENST00000516265 103 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC135628.1-201ENST00000568867 534 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC010546.1-201ENST00000569391 485 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 MIR3616-201ENST00000584070 92 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 SNORD39.3-201ENST00000584451 71 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AL121917.1-203ENST00000605534 577 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC016911.1-201ENST00000613297 452 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AL356585.4-201ENST00000623078 1229 ntBASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UPF3BQ9BZI7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC009812.4-201ENST00000569134 1805 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 RNU6-619P-201ENST00000365146 108 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 SNORA67.3-201ENST00000384366 140 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 RNU6-882P-201ENST00000391025 103 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC027124.2-201ENST00000428249 105 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 Z98742.2-201ENST00000431564 187 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 OR4K11P-201ENST00000431829 904 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 PGBD4P3-201ENST00000440731 581 ntBASIC2.45□□□□□ -2.02
UPF3BQ9BZI7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms