Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC005921.1-201ENST00000510589 286 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC104619.4-201ENST00000510773 249 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC114797.1-201ENST00000514003 728 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 FAM60BP-201ENST00000578364 658 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC015917.1-201ENST00000579654 510 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC006116.10-201ENST00000591836 581 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 VN1R80P-201ENST00000597126 338 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 PNPT1P2-201ENST00000456768 2050 ntBASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRFN3Q9BTN0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 RNU6-1322P-201ENST00000364309 107 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 TXNP7-201ENST00000406296 293 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC007283.2-201ENST00000424739 197 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 RPL23AP81-201ENST00000455252 467 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AP000873.1-201ENST00000463987 400 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 RPL35AP15-201ENST00000468042 339 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 HMGB1P22-201ENST00000505315 124 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 FAM60DP-201ENST00000524174 632 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC098848.2-201ENST00000588023 330 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AF038458.1-201ENST00000588406 262 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC018638.8-201ENST00000588755 281 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC012443.1-201ENST00000605605 231 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC103710.2-201ENST00000609912 942 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AC138649.5-201ENST00000637456 137 ntBASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRFN3Q9BTN0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AC073343.1-201ENST00000328239 651 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 RNU6-1120P-201ENST00000362988 108 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 RNU6-511P-201ENST00000363496 107 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 SNORA23-201ENST00000365128 182 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 RNU6-76P-201ENST00000384060 104 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 MIR607-201ENST00000385241 96 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 MIR1271-201ENST00000408537 86 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 OR9R1P-201ENST00000412200 877 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 RPS20P14-201ENST00000412545 360 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 MTATP6P18-201ENST00000417994 673 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 EIF1P3-201ENST00000423841 334 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 MTCO2P12-201ENST00000427426 682 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AC073587.1-201ENST00000447093 876 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 RPS11P1-201ENST00000451072 473 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 snoU13.4-201ENST00000458916 104 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 RN7SL807P-201ENST00000470923 297 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 RN7SL601P-201ENST00000471221 293 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 RPL31P13-201ENST00000484151 370 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AF213884.1-201ENST00000488102 463 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AC004062.1-201ENST00000509926 645 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 RNA5SP360-201ENST00000516555 118 ntBASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.22□□□□□ -1.73
LRFN3Q9BTN0 AC093012.1-202ENST00000549403 582 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms