Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RNU5E-6P-201ENST00000365574 115 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 RN7SKP156-201ENST00000410308 342 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AC007283.2-201ENST00000424739 197 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 MRPS31P2-201ENST00000451581 518 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 MTND4LP3-201ENST00000468320 276 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 RPL21P129-201ENST00000491732 478 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 FCF1P3-201ENST00000496394 590 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 RNU6-1092P-201ENST00000516955 87 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AP006587.4-201ENST00000526053 529 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 RPS3AP4-201ENST00000555161 764 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 GLUD1P4-201ENST00000590914 418 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AC022146.1-201ENST00000595307 847 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AC245389.1-201ENST00000605141 529 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AC087752.4-201ENST00000605911 462 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 SNORA51-201ENST00000606420 132 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AC135507.1-201ENST00000607214 561 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AL161629.2-201ENST00000615347 275 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 AC244100.1-202ENST00000621554 382 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 FARSBP1-201ENST00000435808 1778 ntBASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HERPUD2Q9BSE4 TEX21P-201ENST00000447107 1476 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 HSPE1P11-201ENST00000339579 310 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 U8.3-201ENST00000363321 132 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 RNU4-1-201ENST00000363925 141 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 SNORA62.3-201ENST00000365110 153 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 HSPE1P1-201ENST00000421494 318 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 RPL21P40-201ENST00000428586 483 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 MTCO2P16-201ENST00000436962 677 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 ARPC3P1-201ENST00000437218 533 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 SNORA84-201ENST00000459229 133 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AC104472.2-201ENST00000469035 601 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 Vault.3-201ENST00000516676 95 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 RPL21P12-201ENST00000559810 515 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AC040904.1-201ENST00000590850 223 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AL161734.1-201ENST00000609720 557 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AL357559.1-201ENST00000622228 274 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AP003122.6-201ENST00000623831 495 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
HERPUD2Q9BSE4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 SNORA20.2-201ENST00000383922 131 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 RNU6-217P-201ENST00000384164 104 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 RNU6-198P-201ENST00000384258 104 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 SNORA48.7-201ENST00000391302 135 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 RHEBP3-201ENST00000411920 351 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AL591419.1-201ENST00000427423 339 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 ISCA1P6-201ENST00000427740 390 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AC073614.1-201ENST00000438690 650 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 MTND4P25-201ENST00000441039 533 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AL022238.1-201ENST00000442557 355 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 NOTCH2P1-201ENST00000443481 624 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AL136380.1-201ENST00000447970 162 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 GAPDHP17-201ENST00000449858 1001 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 AC073387.1-201ENST00000453261 709 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 RNU6-953P-201ENST00000459154 107 ntBASIC3.78□□□□□ -1.8
HERPUD2Q9BSE4 RPL7L1P8-201ENST00000469911 741 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms