Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ZNF285B-201ENST00000561698 1767 ntBASIC3.51□□□□□ -1.85
PKP4Q99569 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
PKP4Q99569 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 CCT4P2-201ENST00000233836 1548 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 AC090740.1-201ENST00000623193 2262 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.5□□□□□ -1.85
PKP4Q99569 U8.3-201ENST00000363321 132 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 RNA5SP42-201ENST00000364278 115 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 Y_RNA.303-201ENST00000364998 94 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 Y_RNA.453-201ENST00000384223 109 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 RPS20P2-201ENST00000402520 389 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 CCNG1P1-201ENST00000406783 885 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 ATP5A1P2-201ENST00000412323 255 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.5□□□□□ -1.85
PKP4Q99569 CCDC58P2-201ENST00000417131 366 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 PIGFP2-201ENST00000421400 651 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 MTCO1P39-201ENST00000426148 480 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 MTCO2P19-201ENST00000427513 598 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.5□□□□□ -1.85
PKP4Q99569 AL358934.1-201ENST00000432346 324 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.5□□□□□ -1.85
PKP4Q99569 ARPC3P1-201ENST00000437218 533 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 AL451074.3-201ENST00000437709 472 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 AL121601.2-201ENST00000438019 707 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 AC112653.1-201ENST00000443851 386 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.5□□□□□ -1.85
PKP4Q99569 AL359385.1-201ENST00000456509 365 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 RPL21P129-201ENST00000491732 478 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.5□□□□□ -1.85
PKP4Q99569 SAP18P1-201ENST00000512058 390 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.5□□□□□ -1.85
PKP4Q99569 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.5□□□□□ -1.85
PKP4Q99569 RNU1-95P-201ENST00000516357 160 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 RNU1-128P-201ENST00000516704 160 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 RNU2-46P-201ENST00000517038 113 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 AC023632.4-201ENST00000517783 191 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 RANP9-201ENST00000519957 271 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 AP001893.2-201ENST00000526949 202 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 AP003122.4-201ENST00000530980 758 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.5□□□□□ -1.85
PKP4Q99569 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.5□□□□□ -1.85
PKP4Q99569 AL121579.1-201ENST00000555129 305 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 FAM60BP-201ENST00000578364 658 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.5□□□□□ -1.85
PKP4Q99569 SNORA51-201ENST00000606420 132 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.5□□□□□ -1.85
PKP4Q99569 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.5□□□□□ -1.85
PKP4Q99569 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.5□□□□□ -1.85
PKP4Q99569 AC097714.1-201ENST00000511272 1647 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 CEP170P1-201ENST00000502249 4587 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 ZNF826P-207ENST00000622273 1910 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.5□□□□□ -1.85
PKP4Q99569 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 ZNF807-201ENST00000328088 1707 ntBASIC3.5□□□□□ -1.85
PKP4Q99569 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PKP4Q99569 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.49□□□□□ -1.85
PKP4Q99569 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.49□□□□□ -1.85
PKP4Q99569 SNORD9-201ENST00000362566 104 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 RNY4P14-201ENST00000363656 96 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 RNU6-173P-201ENST00000364215 104 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 RNU6-114P-201ENST00000384704 105 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 MIR134-201ENST00000385258 73 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 CALM2P3-201ENST00000400429 449 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AL136372.1-201ENST00000403060 228 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 RN7SKP285-201ENST00000410137 318 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 RNU4-55P-201ENST00000410731 137 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AC069157.1-201ENST00000421749 137 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 MTCO2P5-201ENST00000422621 426 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.49□□□□□ -1.85
PKP4Q99569 AC006989.1-201ENST00000427212 131 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.49□□□□□ -1.85
PKP4Q99569 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.49□□□□□ -1.85
PKP4Q99569 HMGB1P31-201ENST00000437242 427 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AC004866.2-201ENST00000438285 481 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 HSPE1P28-201ENST00000443139 211 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 RPL17P49-201ENST00000443728 411 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AL671855.1-201ENST00000446875 1203 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 NFU1P2-201ENST00000448700 469 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.49□□□□□ -1.85
PKP4Q99569 U3.44-201ENST00000458938 192 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.49□□□□□ -1.85
PKP4Q99569 RPS23P3-201ENST00000470993 430 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.49□□□□□ -1.85
PKP4Q99569 MTND1P3-201ENST00000484956 952 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AC019235.1-201ENST00000503847 207 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AC009646.1-201ENST00000510455 318 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AC010493.1-201ENST00000513479 292 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 SNORA70.18-201ENST00000516696 98 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 OR5AQ1P-201ENST00000527596 927 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PKP4Q99569 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms