Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC243972.3-201ENST00000539655 198 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC023050.3-201ENST00000541142 333 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 RPS3AP23-202ENST00000574601 686 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 IPO5P1-202ENST00000600039 287 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AL354984.3-201ENST00000604803 325 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC128687.2-201ENST00000609657 566 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC064801.1-201ENST00000612025 407 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC023043.4-201ENST00000612081 449 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 FAM27D1-201ENST00000612308 341 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC005858.4-201ENST00000623191 700 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX18Q96RF0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX18Q96RF0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 DDX10P1-201ENST00000448545 1933 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX18Q96RF0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX18Q96RF0 RNU1-18P-201ENST00000363062 164 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 Y_RNA.509-201ENST00000384506 99 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 Y_RNA.535-201ENST00000384612 99 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 RPL32P23-201ENST00000397237 405 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 RNU2-39P-201ENST00000410604 198 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 RPL21P24-201ENST00000413752 448 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 PDCL2P1-201ENST00000419302 352 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC018630.2-202ENST00000422992 927 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 PHBP16-201ENST00000446318 950 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 MRPS17P3-201ENST00000465453 385 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 RPL38P4-201ENST00000502376 214 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC004062.1-201ENST00000509926 645 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC105417.1-201ENST00000514691 285 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 SNORA31.9-201ENST00000516429 84 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 AL121603.1-201ENST00000553815 142 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 MIR4293-201ENST00000584305 78 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 XIAPP1-201ENST00000603162 600 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC114781.5-201ENST00000615297 108 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC010133.1-201ENST00000615809 842 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 MIR6130-201ENST00000619419 109 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC068831.8-201ENST00000620171 435 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AL136221.1-201ENST00000621449 509 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC243312.2-201ENST00000623340 601 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC090617.10-201ENST00000624308 134 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC068724.3-201ENST00000625906 87 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 AC008013.2-202ENST00000637965 364 ntBASIC3.78□□□□□ -1.8
SNX18Q96RF0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX18Q96RF0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX18Q96RF0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNX18Q96RF0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNX18Q96RF0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX18Q96RF0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 RNU6-188P-201ENST00000364207 107 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 SNORD81.2-201ENST00000365153 76 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 SNORA32.2-201ENST00000384049 122 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 MIR1193-201ENST00000408109 78 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 RPL23AP26-201ENST00000412728 464 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 EEF1A1P40-201ENST00000412883 573 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 RPS7P15-201ENST00000415804 584 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 AC016831.2-201ENST00000417179 352 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 SSXP9-201ENST00000417503 292 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 AC017083.1-201ENST00000428093 483 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 RPS29P17-201ENST00000430795 166 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 TAAR7P-201ENST00000436141 242 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.77□□□□□ -1.81
SNX18Q96RF0 AL121871.1-201ENST00000443413 436 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 RPL7P12-201ENST00000446719 750 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 AL162389.1-201ENST00000449233 177 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 NUTF2P7-201ENST00000453086 375 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 ANP32BP2-201ENST00000454525 545 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 RNU7-182P-201ENST00000459009 62 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 Y_RNA.675-201ENST00000516389 149 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 BTF3P12-201ENST00000519620 469 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 OR5AL2P-201ENST00000532185 920 ntBASIC3.77□□□□□ -1.81
SNX18Q96RF0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms