Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 MIR4715-201ENST00000584117 79 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC015726.1-201ENST00000602353 681 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC007363.1-201ENST00000604736 620 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC007619.2-201ENST00000605743 379 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AL161734.1-201ENST00000609720 557 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC019176.2-201ENST00000611579 315 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC068831.8-201ENST00000620171 435 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AL589994.2-201ENST00000621124 579 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CMTM3Q96MX0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC073343.1-201ENST00000328239 651 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 Y_RNA.245-201ENST00000364493 95 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 RNU6-169P-201ENST00000365336 107 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 SMIM11P1-201ENST00000369586 178 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 RNU6-39P-201ENST00000384344 107 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 RNU6-140P-201ENST00000384566 108 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AL136116.1-201ENST00000403591 381 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC017079.2-201ENST00000416102 485 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 MTND3P17-201ENST00000416968 344 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 ZNF863P-201ENST00000426746 417 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 RPL23AP82-202ENST00000427528 469 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC104651.1-201ENST00000427559 735 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 RPS24P1-201ENST00000438550 371 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC010401.1-201ENST00000463867 348 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC009643.1-201ENST00000532030 391 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 RPL21P12-201ENST00000559810 515 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 MIR4284-201ENST00000578924 81 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 GLUD1P4-201ENST00000590914 418 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 IPO5P1-202ENST00000600039 287 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC245014.2-201ENST00000603689 287 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC098826.3-201ENST00000603823 466 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC104763.2-201ENST00000604179 382 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AL356218.2-201ENST00000605264 187 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC246785.4-201ENST00000605374 287 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC006566.1-201ENST00000608943 513 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AL365204.3-201ENST00000612448 685 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AC072046.2-201ENST00000618366 268 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AP000346.3-201ENST00000622821 210 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 AL732372.2-225ENST00000642124 456 ntBASIC3.27□□□□□ -1.89
CMTM3Q96MX0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CMTM3Q96MX0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 UBE2L2-201ENST00000254302 429 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 OR5J1P-201ENST00000313544 939 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 RNU1-75P-201ENST00000347264 129 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 MIR558-201ENST00000384920 94 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 RNU6-817P-201ENST00000391083 104 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AC108032.1-201ENST00000416706 207 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 BX295541.1-201ENST00000417774 250 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 ELOCP14-201ENST00000428070 331 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 ELOCP7-201ENST00000439968 331 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 HMGB3P11-201ENST00000440127 604 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AL031183.1-201ENST00000457667 207 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 snoU13.28-201ENST00000459235 104 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 RPL37P6-201ENST00000460682 294 ntBASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.26□□□□□ -1.89
CMTM3Q96MX0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms