Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC018638.7-201ENST00000605836 1114 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC097468.3-201ENST00000607956 456 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AL159169.3-201ENST00000608871 561 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AL391813.2-201ENST00000609113 322 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AL161734.1-201ENST00000609720 557 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AL360219.1-201ENST00000610230 366 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC107871.2-201ENST00000612894 502 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC131159.1-201ENST00000621854 213 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC091953.5-201ENST00000622919 233 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 AC097520.1-201ENST00000624435 385 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC00477Q96M19 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC00477Q96M19 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.17□□□□□ -2.06
LINC00477Q96M19 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC096644.4-201ENST00000563417 2912 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC000403.1-201ENST00000613696 3585 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC005539.1-201ENST00000443768 1479 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 SNORA71.3-201ENST00000362582 128 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 RNU6-744P-201ENST00000365557 107 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 RNU6-1316P-201ENST00000384242 108 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AL136372.1-201ENST00000403060 228 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 SUMO1P4-201ENST00000429430 302 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 MTATP6P17-201ENST00000431030 672 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 OR4K11P-201ENST00000431829 904 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 RPS20P5-201ENST00000434808 360 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 RPL23AP74-201ENST00000437246 471 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 RPS29P6-201ENST00000438196 145 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AL354941.1-201ENST00000438600 464 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC009961.3-201ENST00000449832 765 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AL133217.1-201ENST00000450980 425 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 SUMO2P2-201ENST00000456482 255 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AL672167.3-201ENST00000465951 960 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC104685.1-201ENST00000502445 371 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC010486.2-201ENST00000505572 483 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 CBX3P3-201ENST00000508108 532 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 MRPS33P3-201ENST00000513456 322 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC034159.1-201ENST00000513885 583 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 AP003461.1-201ENST00000528866 78 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AP000857.1-201ENST00000532151 543 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AP000867.2-201ENST00000532468 320 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC008015.1-201ENST00000555505 465 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 MED28P6-201ENST00000558776 231 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 H3F3AP1-201ENST00000559984 334 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 MIR544B-201ENST00000582372 78 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AC079089.3-201ENST00000603094 673 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 MIR7112-201ENST00000616126 65 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 AL596245.1-201ENST00000618994 362 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC00477Q96M19 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.16□□□□□ -2.06
LINC00477Q96M19 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
LINC00477Q96M19 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.15□□□□□ -2.06
LINC00477Q96M19 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
LINC00477Q96M19 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
LINC00477Q96M19 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LINC00477Q96M19 Y_RNA.97-201ENST00000363094 102 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 SNORA38.1-201ENST00000364172 131 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 Y_RNA.302-201ENST00000364997 102 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
LINC00477Q96M19 RNU6-723P-201ENST00000383973 107 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 MIR493-201ENST00000385254 89 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC119751.3-201ENST00000399720 670 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 MTATP6P27-201ENST00000416987 621 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 MTCO1P39-201ENST00000426148 480 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC022018.1-201ENST00000430685 241 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 AC004866.2-201ENST00000438285 481 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.15□□□□□ -2.07
LINC00477Q96M19 GDI2P2-201ENST00000445131 608 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 VN1R34P-201ENST00000447387 883 ntBASIC2.15□□□□□ -2.07
LINC00477Q96M19 RPL37P4-201ENST00000448908 268 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms