Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC009452.1-201ENST00000640823 606 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.1□□□□□ -2.23
SPG11Q96JI7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.1□□□□□ -2.23
SPG11Q96JI7 AC009812.4-201ENST00000569134 1805 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 RNU6-670P-201ENST00000364312 104 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 RNU6-997P-201ENST00000384725 107 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 AL033519.2-201ENST00000403958 392 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 AC109583.1-201ENST00000432156 268 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 AC000111.3-201ENST00000433478 193 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.1□□□□□ -2.23
SPG11Q96JI7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.1□□□□□ -2.23
SPG11Q96JI7 AC096571.1-202ENST00000506634 735 ntBASIC1.1□□□□□ -2.23
SPG11Q96JI7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.1□□□□□ -2.23
SPG11Q96JI7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
SPG11Q96JI7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SPG11Q96JI7 RNU4-52P-201ENST00000384209 138 ntBASIC1.09□□□□□ -2.23
SPG11Q96JI7 SSXP10-201ENST00000402595 565 ntBASIC1.09□□□□□ -2.23
SPG11Q96JI7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.09□□□□□ -2.23
SPG11Q96JI7 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.09□□□□□ -2.23
SPG11Q96JI7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.09□□□□□ -2.23
SPG11Q96JI7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.09□□□□□ -2.23
SPG11Q96JI7 OR4V1P-201ENST00000525394 1140 ntBASIC1.09□□□□□ -2.23
SPG11Q96JI7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.09□□□□□ -2.23
SPG11Q96JI7 AL049838.1-201ENST00000563647 981 ntBASIC1.09□□□□□ -2.23
SPG11Q96JI7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
SPG11Q96JI7 SNORA40.6-201ENST00000391153 128 ntBASIC1.09□□□□□ -2.24
SPG11Q96JI7 DPPA2P1-201ENST00000428060 556 ntBASIC1.09□□□□□ -2.24
SPG11Q96JI7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
SPG11Q96JI7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.09□□□□□ -2.24
SPG11Q96JI7 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.09□□□□□ -2.24
SPG11Q96JI7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.09□□□□□ -2.24
SPG11Q96JI7 RPS27AP18-201ENST00000515536 459 ntBASIC1.09□□□□□ -2.24
SPG11Q96JI7 RNU1-92P-201ENST00000517017 135 ntBASIC1.09□□□□□ -2.24
SPG11Q96JI7 GAS5-AS1-201ENST00000602767 694 ntBASIC1.09□□□□□ -2.24
SPG11Q96JI7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.09□□□□□ -2.24
SPG11Q96JI7 AP002967.1-201ENST00000624203 539 ntBASIC1.09□□□□□ -2.24
SPG11Q96JI7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
SPG11Q96JI7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.09□□□□□ -2.24
SPG11Q96JI7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.24
SPG11Q96JI7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SPG11Q96JI7 RPL26P37-201ENST00000411983 438 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 ZNF965P-201ENST00000432501 817 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 snoU13.19-201ENST00000459148 104 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.08□□□□□ -2.24
SPG11Q96JI7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.08□□□□□ -2.24
SPG11Q96JI7 RN7SKP265-201ENST00000516448 223 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.08□□□□□ -2.24
SPG11Q96JI7 MIR3660-201ENST00000584845 100 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 AC084373.1-201ENST00000603311 235 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.08□□□□□ -2.24
SPG11Q96JI7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SPG11Q96JI7 AC130650.2-201ENST00000618736 2403 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 RNU2-25P-201ENST00000411041 191 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.08□□□□□ -2.24
SPG11Q96JI7 AC233728.2-201ENST00000425348 757 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.08□□□□□ -2.24
SPG11Q96JI7 PTGES3P5-201ENST00000455109 434 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.08□□□□□ -2.24
SPG11Q96JI7 AC025755.1-201ENST00000521306 278 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 APOOP3-201ENST00000536787 586 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 AC013244.3-201ENST00000605614 388 ntBASIC1.08□□□□□ -2.24
SPG11Q96JI7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.08□□□□□ -2.24
SPG11Q96JI7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
SPG11Q96JI7 AL596028.1-201ENST00000326971 197 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 SNRPEP2-201ENST00000397592 279 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 RNU2-40P-201ENST00000410833 196 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.07□□□□□ -2.24
SPG11Q96JI7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.07□□□□□ -2.24
SPG11Q96JI7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.07□□□□□ -2.24
SPG11Q96JI7 UBE2V1P13-201ENST00000436983 439 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 RPS15AP7-201ENST00000439294 405 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 RNF6P1-201ENST00000444889 1784 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 AL031659.1-201ENST00000447075 539 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.07□□□□□ -2.24
SPG11Q96JI7 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.07□□□□□ -2.24
SPG11Q96JI7 AC006499.2-201ENST00000513470 337 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 RNA5SP364-201ENST00000516938 78 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 AC023050.2-201ENST00000544968 387 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.07□□□□□ -2.24
SPG11Q96JI7 AC233266.2-201ENST00000567067 528 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 AC024619.4-201ENST00000580924 316 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SPG11Q96JI7 AC080100.1-201ENST00000624239 5356 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.07□□□□□ -2.24
SPG11Q96JI7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SPG11Q96JI7 Z85995.1-201ENST00000415547 335 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.07□□□□□ -2.24
SPG11Q96JI7 VTA1P2-201ENST00000520205 911 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.07□□□□□ -2.24
SPG11Q96JI7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.07□□□□□ -2.24
SPG11Q96JI7 AP000560.1-201ENST00000624150 1937 ntBASIC1.07□□□□□ -2.24
SPG11Q96JI7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.06□□□□□ -2.24
SPG11Q96JI7 ARL5AP2-201ENST00000444698 533 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.06□□□□□ -2.24
SPG11Q96JI7 AC009127.3-201ENST00000570531 403 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 GLUD1P4-201ENST00000590914 418 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 AC005498.1-201ENST00000592125 465 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 AL031775.1-201ENST00000607014 887 ntBASIC1.06□□□□□ -2.24
SPG11Q96JI7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.06□□□□□ -2.24
SPG11Q96JI7 AC090740.1-201ENST00000623193 2262 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms