Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 RPL21P10-201ENST00000463521 490 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 RN7SL542P-201ENST00000467147 294 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 RPL30P6-201ENST00000475925 342 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 RPL23AP41-201ENST00000484754 458 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 RPL21P13-201ENST00000488305 481 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC135721.1-201ENST00000497954 479 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 SNORA31.15-201ENST00000516771 132 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC100870.1-201ENST00000522035 505 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC013828.2-201ENST00000532487 235 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC007954.1-201ENST00000554198 494 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AL158211.1-201ENST00000566763 763 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 RPL23AP84-201ENST00000571193 464 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC060771.1-201ENST00000582031 164 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 MIR3922-201ENST00000585192 84 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 BNIP3P23-201ENST00000599655 511 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC019159.1-201ENST00000605094 187 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC008962.1-201ENST00000605729 304 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC087683.2-201ENST00000611384 326 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 TUG1_2.1-201ENST00000614234 87 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 MIR7844-201ENST00000616161 122 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 SNHG22-203ENST00000617833 660 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC131159.1-201ENST00000621854 213 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC039056.2-201ENST00000622261 511 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AP000770.2-201ENST00000623694 100 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC079248.2-201ENST00000623779 326 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC079416.3-201ENST00000624479 549 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC012442.3-202ENST00000636742 206 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 AC006927.3-201ENST00000638789 384 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 ASNSP3-201ENST00000451989 1306 ntBASIC2.4□□□□□ -2.03
RPUSD4Q96CM3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AP003122.5-201ENST00000527668 3766 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 RPL9P7-201ENST00000330965 580 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 SNORA23-201ENST00000365128 182 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 MIR19A-201ENST00000384878 82 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 MIR200C-201ENST00000384980 68 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 RNA5SP38-201ENST00000410750 119 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 RPS27AP14-201ENST00000422868 454 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AL590383.1-201ENST00000428602 75 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC091286.1-201ENST00000431233 461 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC009237.8-201ENST00000445492 379 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 OR6C5P-201ENST00000452388 923 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 RN7SL601P-201ENST00000471221 293 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 SETP11-201ENST00000473027 690 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC072039.1-201ENST00000477611 581 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC055855.1-201ENST00000489563 579 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC005178.1-201ENST00000508392 440 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 RNU6-798P-201ENST00000516912 103 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 CASP1P1-201ENST00000526345 212 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 CCNG2P1-201ENST00000549521 1000 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AL133153.1-201ENST00000557756 303 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AMZ2P1-203ENST00000565833 850 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC090616.2-202ENST00000584248 222 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC006130.2-201ENST00000586202 326 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AL031985.2-201ENST00000600955 480 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AL020997.2-201ENST00000602607 184 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC013553.2-201ENST00000604244 589 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC004908.2-201ENST00000609090 574 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AL020991.1-201ENST00000612314 373 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC006111.3-201ENST00000622137 383 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC027309.3-201ENST00000623419 351 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 AC007671.2-201ENST00000637344 619 ntBASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.39□□□□□ -2.03
RPUSD4Q96CM3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms