Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC122133.1-201ENST00000613964 233 ntBASIC2.98□□□□□ -1.93
RFT1Q96AA3 AC026585.1-201ENST00000619582 524 ntBASIC2.98□□□□□ -1.93
RFT1Q96AA3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.98□□□□□ -1.93
RFT1Q96AA3 AC091931.1-201ENST00000623488 728 ntBASIC2.98□□□□□ -1.93
RFT1Q96AA3 AF246928.1-201ENST00000623768 87 ntBASIC2.98□□□□□ -1.93
RFT1Q96AA3 AC068724.3-201ENST00000625906 87 ntBASIC2.98□□□□□ -1.93
RFT1Q96AA3 AC127502.3-201ENST00000636170 1206 ntBASIC2.98□□□□□ -1.93
RFT1Q96AA3 AL390237.1-201ENST00000404226 1415 ntBASIC2.98□□□□□ -1.93
RFT1Q96AA3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.98□□□□□ -1.93
RFT1Q96AA3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 MFSD8-233ENST00000641482 4860 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RFT1Q96AA3 Y_RNA.46-201ENST00000362695 102 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 RNU5F-6P-201ENST00000362979 116 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 SNORA14A-201ENST00000364773 135 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 RNU1-39P-201ENST00000383897 165 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 RPL21P3-201ENST00000395517 478 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 RPL7P25-201ENST00000404151 721 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 RPL32P35-201ENST00000415214 394 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 NPM1P11-201ENST00000417106 855 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 Z99497.1-201ENST00000421282 135 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 AL512286.1-201ENST00000439244 400 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 RPL21P2-201ENST00000440049 481 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 MTCO1P42-201ENST00000457379 726 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 RPS20P20-201ENST00000460498 340 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC146507.2-201ENST00000460608 476 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC008481.1-201ENST00000463278 396 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RFT1Q96AA3 SETP11-201ENST00000473027 690 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC093663.1-201ENST00000497190 394 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 TTC39CP1-201ENST00000512513 755 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 RNU1-143P-201ENST00000516296 146 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 RNU6-201P-201ENST00000517100 61 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AP000907.2-201ENST00000530827 353 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 GTF2IP22-201ENST00000554443 182 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 HMGB1P14-201ENST00000557424 591 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AL157394.1-201ENST00000562983 1224 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC136624.4-201ENST00000573044 370 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC078899.3-201ENST00000599065 212 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC119751.7-201ENST00000600494 245 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 WISP1-OT1-201ENST00000602893 642 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC010591.1-201ENST00000603941 649 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC064872.1-201ENST00000604823 1072 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC004492.1-201ENST00000607036 742 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 U1.23-201ENST00000610293 146 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 RNU1-68P-201ENST00000615382 146 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.97□□□□□ -1.93
RFT1Q96AA3 U1.39-201ENST00000621562 146 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AL392088.2-201ENST00000637607 285 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 AC092435.3-201ENST00000565538 3654 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 TPTE2P4-201ENST00000258589 1605 ntBASIC2.97□□□□□ -1.93
RFT1Q96AA3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
RFT1Q96AA3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RFT1Q96AA3 AC008264.2-201ENST00000610193 3731 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 RNU5A-8P-201ENST00000364102 114 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFT1Q96AA3 Y_RNA.560-201ENST00000384689 102 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 RPS20P2-201ENST00000402520 389 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 AL031577.2-201ENST00000404133 280 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 TXNP7-201ENST00000406296 293 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 CCNG1P1-201ENST00000406783 885 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 Y_RNA.599-201ENST00000410489 109 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 ATP5A1P2-201ENST00000412323 255 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 Z99755.1-201ENST00000414048 380 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.96□□□□□ -1.94
RFT1Q96AA3 AL451054.2-201ENST00000420896 202 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.96□□□□□ -1.94
RFT1Q96AA3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.96□□□□□ -1.94
RFT1Q96AA3 MTCO3P5-201ENST00000433620 714 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 AC092573.2-201ENST00000434546 243 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 AC005094.1-201ENST00000440420 368 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 CBWD4P-201ENST00000445695 655 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 ELOCP30-201ENST00000447108 299 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.96□□□□□ -1.94
RFT1Q96AA3 MTCO2P18-201ENST00000457151 658 ntBASIC2.96□□□□□ -1.94
RFT1Q96AA3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.96□□□□□ -1.94
RFT1Q96AA3 RPS20P22-201ENST00000473700 357 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms