Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HLA-CQ95604 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-CQ95604 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-CQ95604 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-CQ95604 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HLA-CQ95604 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-CQ95604 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HLA-CQ95604 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-CQ95604 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-CQ95604 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-CQ95604 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-CQ95604 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-CQ95604 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
HLA-CQ95604 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-CQ95604 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-CQ95604 RNU6-918P-201ENST00000391219 106 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 AL078599.1-201ENST00000402075 293 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 AL009179.1-201ENST00000406085 265 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 TMSB10P2-201ENST00000416049 131 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 RPL17P36-201ENST00000420302 549 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 GSTM5P1-201ENST00000434751 660 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-CQ95604 snoU13.30-201ENST00000458951 104 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 Y_RNA.638-201ENST00000459374 113 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 AC087477.1-201ENST00000465747 340 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 RPS23P7-201ENST00000466210 444 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 CR383656.1-201ENST00000484916 377 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 SNORD116-28-201ENST00000516123 91 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-CQ95604 AC022968.1-201ENST00000567372 442 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 MIR4284-201ENST00000578924 81 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 AC023575.1-201ENST00000580510 358 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 AC060766.3-201ENST00000591442 263 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 MIR132-201ENST00000591554 101 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 AL353748.2-201ENST00000622148 471 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-CQ95604 AC112243.1-201ENST00000623949 3851 ntBASIC5.73□□□□□ -1.49
HLA-CQ95604 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HLA-CQ95604 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-CQ95604 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-CQ95604 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-CQ95604 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HLA-CQ95604 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HLA-CQ95604 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-CQ95604 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-CQ95604 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-CQ95604 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HLA-CQ95604 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-CQ95604 AC008725.1-201ENST00000605123 2263 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-CQ95604 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-CQ95604 UBE2WP1-201ENST00000362030 340 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 RNU6-804P-201ENST00000384286 107 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 SNORA16A-201ENST00000384342 137 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HLA-CQ95604 AL354868.1-201ENST00000417077 482 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 AL031659.1-201ENST00000447075 539 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 U8.22-201ENST00000459141 133 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-CQ95604 SNORD116-26-201ENST00000516006 96 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 Y_RNA.679-201ENST00000516416 91 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 MTND5P41-201ENST00000517498 206 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 AC134698.5-201ENST00000519444 336 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 ATP5F1P5-201ENST00000526403 760 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 AC008033.2-201ENST00000542626 177 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 AC136624.4-201ENST00000573044 370 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 MIR1254-2-201ENST00000579553 63 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 AC067852.4-201ENST00000590314 478 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 AC002545.1-201ENST00000592511 181 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 AL360181.4-201ENST00000621752 134 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 MTND1P7-201ENST00000632801 297 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 AL731532.2-201ENST00000623542 1953 ntBASIC5.72□□□□□ -1.49
HLA-CQ95604 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-CQ95604 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-CQ95604 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HLA-CQ95604 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-CQ95604 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-CQ95604 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
HLA-CQ95604 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-CQ95604 AC110373.1-201ENST00000505994 3505 ntBASIC5.71□□□□□ -1.49
HLA-CQ95604 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-CQ95604 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.71□□□□□ -1.49
HLA-CQ95604 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.71□□□□□ -1.49
HLA-CQ95604 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
HLA-CQ95604 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
HLA-CQ95604 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HLA-CQ95604 SNURFL-201ENST00000309296 343 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-CQ95604 SNORA25.1-201ENST00000362326 128 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 RNU6-514P-201ENST00000384208 107 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 RNU6-22P-201ENST00000384355 107 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 Y_RNA.569-201ENST00000384749 103 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 MIR34A-201ENST00000385130 110 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 AL390729.2-201ENST00000416137 156 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-CQ95604 AL590399.4-201ENST00000436561 601 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 AC005002.2-201ENST00000438228 269 ntBASIC5.71□□□□□ -1.5
HLA-CQ95604 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms