Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 HMGB3P15-201ENST00000507326 574 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-720P-201ENST00000516363 108 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 SNORA18.6-201ENST00000516792 115 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC068657.1-201ENST00000520807 306 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 MTCYBP20-201ENST00000524239 1129 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AP003181.2-201ENST00000528941 181 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 EIF1P4-201ENST00000572664 335 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC137800.2-201ENST00000574375 120 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 MTND1P15-201ENST00000579262 949 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 MIR3690-201ENST00000580266 75 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 MIR3118-1-201ENST00000581787 76 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 DUXAP4-201ENST00000603046 613 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AL590282.1-201ENST00000610379 1136 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC013562.2-201ENST00000611632 603 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC015967.1-201ENST00000619893 476 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC091953.2-201ENST00000623979 160 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AL159972.1-201ENST00000625150 448 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AL034408.1-202ENST00000636088 415 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AL353746.1-201ENST00000566293 6881 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC116096.1-201ENST00000566804 2314 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC092447.7-201ENST00000422212 1621 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC004972.1-201ENST00000623934 2209 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AL356274.2-201ENST00000624379 3752 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 U3.11-201ENST00000364476 212 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 SNORA5A-201ENST00000384111 134 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 Y_RNA.582-201ENST00000391023 95 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 HMGN1P24-201ENST00000412282 298 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 HMGB3P23-201ENST00000414981 585 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 C1DP2-201ENST00000418167 426 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AL035423.1-201ENST00000420331 213 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 RNU7-59P-201ENST00000459101 61 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 MTCO2P29-201ENST00000465212 189 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC011825.1-201ENST00000484967 388 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC138853.1-201ENST00000503549 823 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 RNU1-143P-201ENST00000516296 146 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-798P-201ENST00000516912 103 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 MTCO2P4-201ENST00000517968 247 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 DUXAP2-201ENST00000519198 589 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AL133153.1-201ENST00000557756 303 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC037471.2-201ENST00000564941 598 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 MIR3146-201ENST00000580367 79 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 KC877982.1-201ENST00000602313 470 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC006557.5-201ENST00000603126 811 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC010591.1-201ENST00000603941 649 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AL391813.2-201ENST00000609113 322 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 U1.23-201ENST00000610293 146 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC093838.1-201ENST00000613014 469 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC091834.1-201ENST00000614543 472 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 RNU1-68P-201ENST00000615382 146 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 uc_338.12-201ENST00000616344 181 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 MIR6075-201ENST00000620782 95 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 U1.39-201ENST00000621562 146 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AC112204.3-201ENST00000623822 332 ntBASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC44A1Q8WWI5 TAB3P1-202ENST00000452645 1634 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 RNA5SP197-201ENST00000363357 119 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 RNU4-1-201ENST00000363925 141 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-1074P-201ENST00000383995 104 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 Y_RNA.517-201ENST00000384551 106 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 RPL23AP32-201ENST00000395315 459 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 MRPL42P2-201ENST00000403169 426 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-516P-201ENST00000411381 104 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AL451062.2-201ENST00000427515 271 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC091286.1-201ENST00000431233 461 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 TIMM9P1-201ENST00000436122 256 ntBASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A1Q8WWI5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms