Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 RNU1-93P-201ENST00000364704 169 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 MIR627-201ENST00000384979 97 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 SNORA67.6-201ENST00000391093 99 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 GTF2IP7-202ENST00000436677 309 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 RPL35AP22-201ENST00000436855 335 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 HMGN1P8-201ENST00000463578 288 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 MRPS17P9-201ENST00000511924 393 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC009127.3-201ENST00000570531 403 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 MIR3935-201ENST00000583472 104 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 SDR42E1P2-201ENST00000614861 481 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC068831.7-201ENST00000616954 363 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 SDR42E1P4-201ENST00000620894 481 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 MIR6734-201ENST00000621166 68 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AP001350.1-201ENST00000601906 1524 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 CDC27P3-201ENST00000635418 1910 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 RPL23AP29-201ENST00000397284 453 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AC073264.1-201ENST00000411508 416 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 PSPHP1-201ENST00000450062 261 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AC234775.1-201ENST00000454247 670 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AL138976.2-201ENST00000563989 694 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 RNU6-1032P-201ENST00000384100 107 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AC007560.1-201ENST00000426912 237 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AL645568.3-201ENST00000433683 316 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AC069528.1-202ENST00000482888 637 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AC083923.1-201ENST00000523708 376 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 AL158801.5-201ENST00000623123 465 ntBASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
ALMS1Q8TCU4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 AL157827.1-201ENST00000447622 132 ntBASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 HMGB1P26-201ENST00000452520 628 ntBASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 AC034222.1-201ENST00000494052 532 ntBASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 RNU6-347P-201ENST00000516658 105 ntBASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 RNU2-44P-201ENST00000516795 194 ntBASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 AC005730.3-201ENST00000583067 366 ntBASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 AP005137.2-201ENST00000609238 400 ntBASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 AC012640.5-201ENST00000623897 319 ntBASIC1.03□□□□□ -2.25
ALMS1Q8TCU4 MIR320A-201ENST00000385302 82 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AL035405.1-201ENST00000400795 710 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC241520.1-201ENST00000422654 1099 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AL136380.1-201ENST00000447970 162 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC090453.1-201ENST00000495560 436 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC011330.2-201ENST00000621680 635 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 MTND5P10-201ENST00000603719 1809 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 MIR517C-201ENST00000385103 95 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC233728.2-201ENST00000425348 757 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC092989.1-201ENST00000481235 277 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 ARL2BPP4-201ENST00000506854 471 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC109446.2-201ENST00000567872 497 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC090897.2-201ENST00000581715 130 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AL353770.2-201ENST00000620024 78 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 SNORA16.1-201ENST00000364597 132 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 MTND1P18-201ENST00000448191 573 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 ANP32BP3-201ENST00000559213 706 ntBASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.02□□□□□ -2.25
ALMS1Q8TCU4 SNORA46.1-201ENST00000391069 153 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 MTCYBP35-201ENST00000503630 1137 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 NDUFS5P6-201ENST00000529136 295 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 RBBP8P1-201ENST00000449447 1844 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 MIR548J-201ENST00000408833 112 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 CALM1P1-201ENST00000442082 433 ntBASIC1.01□□□□□ -2.25
ALMS1Q8TCU4 MIR7974-201ENST00000615835 79 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms