Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AP001804.3-201ENST00000525146 880 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 OR4V1P-201ENST00000525394 1140 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC016957.1-201ENST00000534895 309 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 AC098679.5-201ENST00000624394 571 ntBASIC0.55□□□□□ -2.32
SYNE1Q8NF91 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.55□□□□□ -2.32
SYNE1Q8NF91 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RNU6-666P-201ENST00000363499 107 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 TATDN1P1-201ENST00000414123 891 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AP1B1P2-201ENST00000416196 106 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC017099.1-201ENST00000448261 1028 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC011979.1-201ENST00000472300 483 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RPL21P93-201ENST00000480465 489 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC233702.1-201ENST00000482905 502 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC093591.1-201ENST00000491435 481 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC114801.2-201ENST00000503825 781 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC080078.3-201ENST00000605407 463 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC090525.3-201ENST00000605601 189 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RNY1P4-201ENST00000384595 115 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC092745.2-202ENST00000411880 369 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC004965.1-201ENST00000413033 213 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 UBE2V1P9-201ENST00000414760 368 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RPL23AP7-203ENST00000449021 469 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 NAMPTP2-201ENST00000505629 1115 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 MIR4255-201ENST00000579351 72 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC021382.1-201ENST00000483523 359 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 CIR1P1-201ENST00000524055 1133 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC104581.2-201ENST00000572227 430 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 MIR4421-201ENST00000578133 69 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC006963.1-201ENST00000624003 1052 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RNA5SP393-201ENST00000363423 117 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 COX6CP12-201ENST00000446748 202 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 BX322784.1-201ENST00000455793 1077 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC022634.1-201ENST00000520765 532 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RPS3AP23-202ENST00000574601 686 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 DUXAP3-201ENST00000603616 594 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC113368.1-201ENST00000603736 382 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 TPTE2P4-201ENST00000258589 1605 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 DEFB109C-201ENST00000382575 264 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 DEFB109B-201ENST00000382656 264 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RNU6-1027P-201ENST00000383998 107 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL513185.2-201ENST00000425543 193 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 HMGB1P22-201ENST00000505315 124 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC011260.1-201ENST00000578420 472 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 MIR5194-201ENST00000582634 120 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AP003117.1-201ENST00000602771 554 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL096840.1-201ENST00000603287 93 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC006026.1-201ENST00000444025 1803 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AP002907.1-201ENST00000606361 1430 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL121871.1-201ENST00000443413 436 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL359273.1-201ENST00000510918 627 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RNU6-1308P-201ENST00000516817 103 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 CR383656.8-201ENST00000549046 145 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC110792.4-201ENST00000609843 298 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms