Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC007685.1-201ENST00000329806 452 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-50P-201ENST00000362356 103 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 RNY1P12-201ENST00000364251 105 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 SNORA63C-201ENST00000364578 129 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 Y_RNA.384-201ENST00000383909 102 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AL138878.1-201ENST00000405131 347 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 CRYBB2P1-203ENST00000415709 538 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC009161.1-201ENST00000417306 376 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 NCOR1P3-201ENST00000420479 303 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AL356387.2-201ENST00000422272 243 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 DUTP6-201ENST00000425573 462 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 RPL23AP25-201ENST00000430973 463 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 HMGB1P18-201ENST00000438801 619 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 RPL38P4-201ENST00000502376 214 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 Y_RNA.691-201ENST00000516611 103 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 RNA5SP309-201ENST00000516670 106 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 RNU6-1314P-201ENST00000517139 104 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 OR4R1P-201ENST00000529879 463 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AL352979.3-201ENST00000553515 247 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC007224.1-201ENST00000564410 144 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC104237.2-201ENST00000612456 443 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 MIR6130-201ENST00000619419 109 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC007546.1-201ENST00000619452 559 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC011944.2-201ENST00000624440 683 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 AC134503.1-201ENST00000633048 54 ntBASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIMC1Q8NDZ2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SIMC1Q8NDZ2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.09□□□□□ -1.76
SIMC1Q8NDZ2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC067945.1-201ENST00000342609 618 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-1078P-201ENST00000364522 103 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 Y_RNA.255-201ENST00000364581 97 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 RNY4P16-201ENST00000364768 94 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 MIR3065-201ENST00000390137 79 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 RNU2-43P-201ENST00000410306 190 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 RNU2-37P-201ENST00000410695 177 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 GPM6BP2-201ENST00000432046 144 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC236972.2-201ENST00000434979 310 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC004866.2-201ENST00000438285 481 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 HMGB1P12-201ENST00000438594 598 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 RPL23AP52-201ENST00000439311 478 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC114495.1-201ENST00000441274 436 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 GPM6BP1-201ENST00000446387 144 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-329P-201ENST00000459618 107 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 MRPS17P3-201ENST00000465453 385 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 VN1R17P-201ENST00000472048 1090 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC078785.3-201ENST00000476607 425 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC092451.1-201ENST00000480211 153 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 RPL7P42-201ENST00000481005 679 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 RNU4-49P-201ENST00000516080 140 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 TRAV8-5-201ENST00000537369 341 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 RPL23AP97-201ENST00000568955 471 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 MIR3171-201ENST00000584270 74 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 VN1R85P-201ENST00000601587 426 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC079587.1-201ENST00000603846 277 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC010591.1-201ENST00000603941 649 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC110741.2-201ENST00000605278 268 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC090948.1-201ENST00000607464 549 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AL031666.3-201ENST00000609320 1006 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 AC008121.3-201ENST00000618726 433 ntBASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
SIMC1Q8NDZ2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms