Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RPS26P3-201ENST00000470205 348 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AC090543.2-201ENST00000483963 348 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AC004057.1-201ENST00000485827 348 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AC069439.1-201ENST00000494739 167 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AC026784.1-201ENST00000507986 352 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 SEPT14P4-201ENST00000513445 186 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 RNU6-358P-201ENST00000516564 75 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 FO082796.1-201ENST00000523795 183 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 DEFB108D-201ENST00000527787 222 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AC128657.1-201ENST00000549459 145 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 OR4K8P-201ENST00000578842 1048 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AC012493.2-201ENST00000595083 291 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AC012669.1-201ENST00000603209 283 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 AC103710.2-201ENST00000609912 942 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 DUXAP9-208ENST00000622815 614 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 FER-210ENST00000628534 558 ntTSL 5 BASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 ZNF680P1-201ENST00000436625 1469 ntBASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMC1BQ8NDV3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 Y_RNA.303-201ENST00000364998 94 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 MIR124-3-201ENST00000384866 87 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 RNU6-876P-201ENST00000391295 104 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 ATP5A1P2-201ENST00000412323 255 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 SNRPEP10-201ENST00000420249 274 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC005326.1-201ENST00000429197 123 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 RPS20P5-201ENST00000434808 360 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC016696.1-201ENST00000446949 318 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 RPL21P11-201ENST00000461458 483 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC100770.1-201ENST00000532310 322 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC126177.3-201ENST00000551839 688 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 LARP7P3-201ENST00000579888 337 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AL355365.1-201ENST00000616480 294 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 MIR6130-201ENST00000619419 109 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 FRG1KP-201ENST00000623592 341 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC009033.1-201ENST00000624279 431 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 DDX10P1-201ENST00000448545 1933 ntBASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMC1BQ8NDV3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 CASC19-280ENST00000642102 1351 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AC011266.1-201ENST00000624119 3569 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 RNU6-1155P-201ENST00000363554 107 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 SNORD35B-201ENST00000363660 87 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 MIR558-201ENST00000384920 94 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 MIR1-2-201ENST00000384961 85 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 MIR93-201ENST00000385024 80 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 MIR1251-201ENST00000408552 70 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 RNA5SP107-201ENST00000411358 122 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 RBMY1KP-201ENST00000423480 476 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 DDX3P2-201ENST00000446138 111 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 SNORD105B-201ENST00000458770 79 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 RNU6-64P-201ENST00000517119 105 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AC034105.3-201ENST00000565294 442 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 SNORD84-203ENST00000584275 78 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AC244505.7-201ENST00000599675 272 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AC008638.3-201ENST00000603341 463 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AL713922.2-201ENST00000619384 716 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 AL136313.1-201ENST00000624804 202 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 MIR3662-201ENST00000637030 95 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms