Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CPSF7Q8N684 RPS3AP24-201ENST00000407896 734 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 HMGN1P24-201ENST00000412282 298 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 BX842559.1-201ENST00000419615 532 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 RPL17P49-201ENST00000443728 411 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 AL033528.1-201ENST00000453780 140 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC091179.1-201ENST00000461606 579 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC022483.1-201ENST00000514020 567 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 HMGN1P28-201ENST00000521340 364 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 SNRPGP16-201ENST00000533275 226 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC125611.2-201ENST00000551907 647 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 COX6CP3-201ENST00000580869 223 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 MIR3611-201ENST00000584484 83 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC009977.1-201ENST00000586015 570 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC040904.1-201ENST00000590850 223 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC011468.4-201ENST00000603942 409 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC121334.2-201ENST00000605387 271 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC092140.2-201ENST00000618027 521 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 AC068137.4-201ENST00000638485 296 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 TEX21P-201ENST00000447107 1476 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.28□□□□□ -1.89
CPSF7Q8N684 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CPSF7Q8N684 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 RNU6-432P-201ENST00000384196 109 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 MIR19A-201ENST00000384878 82 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 SPA17P1-201ENST00000416656 452 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC006366.1-201ENST00000422002 759 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AL158156.1-201ENST00000422509 473 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 DPPA2P1-201ENST00000428060 556 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 VDAC1P3-201ENST00000434069 851 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 RPL35AP22-201ENST00000436855 335 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC004866.2-201ENST00000438285 481 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 MTND1P27-201ENST00000451117 902 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 U3.44-201ENST00000458938 192 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 snoU109.1-201ENST00000459339 135 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 SNORD42A-201ENST00000459584 64 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 RAP1BP2-201ENST00000478270 544 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 RN7SL283P-201ENST00000489055 303 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 ARL2BPP4-201ENST00000506854 471 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 AP003467.2-201ENST00000520175 319 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC245166.1-201ENST00000521012 253 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 RPL21P5-201ENST00000554662 472 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 AP001330.4-201ENST00000604350 154 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC007038.2-201ENST00000608095 740 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC004908.2-201ENST00000609090 574 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC092656.1-203ENST00000624134 423 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC139792.2-201ENST00000624218 587 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC099654.13-201ENST00000639774 207 ntBASIC3.27□□□□□ -1.89
CPSF7Q8N684 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.27□□□□□ -1.89
CPSF7Q8N684 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CPSF7Q8N684 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CPSF7Q8N684 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
CPSF7Q8N684 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CPSF7Q8N684 TAB3P1-202ENST00000452645 1634 ntBASIC3.26□□□□□ -1.89
CPSF7Q8N684 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CPSF7Q8N684 RNA5SP267-201ENST00000364893 126 ntBASIC3.26□□□□□ -1.89
CPSF7Q8N684 RN7SKP111-201ENST00000410349 271 ntBASIC3.26□□□□□ -1.89
CPSF7Q8N684 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.26□□□□□ -1.89
CPSF7Q8N684 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
CPSF7Q8N684 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CPSF7Q8N684 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.26□□□□□ -1.89
CPSF7Q8N684 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.26□□□□□ -1.89
CPSF7Q8N684 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.26□□□□□ -1.89
CPSF7Q8N684 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.26□□□□□ -1.89
CPSF7Q8N684 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.26□□□□□ -1.89
CPSF7Q8N684 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.26□□□□□ -1.89
CPSF7Q8N684 AL022238.1-201ENST00000442557 355 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms