Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 AL162413.1-201ENST00000603198 110 ntBASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 AC012531.5-201ENST00000611375 151 ntBASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 AC245517.5-201ENST00000611529 162 ntBASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 uc_338.12-201ENST00000616344 181 ntBASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 AC073544.1-201ENST00000600110 1595 ntBASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLIP4Q8N3C7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RNU6-1097P-201ENST00000363586 107 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RNU6-108P-201ENST00000365558 107 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 MIR19A-201ENST00000384878 82 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RNU2-9P-201ENST00000410194 145 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 MRPL50P2-201ENST00000416821 482 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 FTH1P6-201ENST00000430768 320 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 GPR143P-201ENST00000434155 205 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RPS15AP9-201ENST00000439856 381 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 BNIP3P2-201ENST00000441221 577 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC006480.1-201ENST00000449887 378 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 FDX1P2-201ENST00000450769 375 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 ST13P14-201ENST00000474095 734 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RPS29P25-201ENST00000481709 171 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 PCBP2P3-201ENST00000509726 843 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC017037.2-201ENST00000513850 890 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RNA5SP164-201ENST00000516533 110 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RN7SKP60-201ENST00000516985 239 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AP003072.2-201ENST00000527756 676 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC008011.1-201ENST00000545989 227 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 COX6CP3-201ENST00000580869 223 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC098848.2-201ENST00000588023 330 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC005255.1-201ENST00000593748 216 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 NRBF2P5-201ENST00000603087 788 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC112230.1-201ENST00000604342 547 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC007038.2-201ENST00000608095 740 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC104260.1-201ENST00000616660 539 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AL359314.1-201ENST00000616913 261 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 AC104985.2-201ENST00000620598 500 ntBASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 FER-210ENST00000628534 558 ntTSL 5 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLIP4Q8N3C7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 MTND4P12-201ENST00000498999 1377 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 CEP170P1-201ENST00000502249 4587 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 RNU6-797P-201ENST00000363101 109 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 RNU5A-8P-201ENST00000364102 114 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 MIR30B-201ENST00000384850 88 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 MIR1-2-201ENST00000384961 85 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 RNU6-278P-201ENST00000390945 109 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 RNA5SP424-201ENST00000390988 115 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 RNU6-908P-201ENST00000410160 94 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 RNU2-62P-201ENST00000410868 191 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 GTF2IP20-201ENST00000431663 360 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 AL606489.2-201ENST00000433886 234 ntBASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.43□□□□□ -1.86
CLIP4Q8N3C7 TPT1P14-201ENST00000448018 505 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms