Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 MIR1269B-201ENST00000580405 75 ntBASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 MIR3176-201ENST00000582210 90 ntBASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 AC012417.1-201ENST00000582307 1039 ntBASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 AC098826.3-201ENST00000603823 466 ntBASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 AL138889.2-201ENST00000603883 242 ntBASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 AL161798.1-201ENST00000604630 131 ntBASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 AL136295.6-201ENST00000610486 658 ntBASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 RNVU1-4-201ENST00000612985 164 ntBASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 AC010338.1-201ENST00000621823 717 ntBASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 AL353746.1-201ENST00000566293 6881 ntBASIC3.63□□□□□ -1.83
CCDC28AQ8IWP9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 ZNF826P-207ENST00000622273 1910 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 RN7SKP103-201ENST00000363848 320 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC092642.1-201ENST00000392417 425 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 CISD1P1-201ENST00000393907 327 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AL590704.1-201ENST00000402856 794 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 FGF7P8-201ENST00000402994 292 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AL606923.1-201ENST00000406616 190 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 RNA5SP111-201ENST00000411386 101 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AL139413.1-201ENST00000421309 217 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 UBE2D3P2-201ENST00000424409 445 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 NRBF2P3-201ENST00000432731 865 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AL049745.1-201ENST00000433953 286 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 HSPD1P21-201ENST00000436541 245 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC104058.1-201ENST00000448028 297 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC073850.1-201ENST00000449243 255 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 RPL23AP11-201ENST00000475260 469 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 CEACAMP10-202ENST00000495431 496 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 HMGB3P15-201ENST00000507326 574 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 SUB1P1-201ENST00000524415 382 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC015917.1-201ENST00000579654 510 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC053481.4-201ENST00000583164 216 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC060780.3-201ENST00000589464 80 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 BNIP3P9-201ENST00000603714 553 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC012409.3-201ENST00000611343 981 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 RMST_3.1-201ENST00000611651 109 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC022467.1-201ENST00000614738 749 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 U6.98-201ENST00000637157 84 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC024614.3-201ENST00000637860 256 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 AC099654.14-201ENST00000638599 341 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 ASNSP3-201ENST00000451989 1306 ntBASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC28AQ8IWP9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AC002546.1-201ENST00000588041 2504 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 RPL23P2-201ENST00000320371 421 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 RNU6-512P-201ENST00000364438 103 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 Y_RNA.245-201ENST00000364493 95 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 RNU6-116P-201ENST00000384042 109 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AL590762.2-201ENST00000395798 571 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 RNU6-373P-201ENST00000411247 98 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AL645608.4-201ENST00000423619 154 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AL451062.2-201ENST00000427515 271 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AL591704.1-201ENST00000432574 275 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 Z82210.1-201ENST00000440037 231 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 PIGFP3-201ENST00000441918 722 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 CEACAMP7-201ENST00000444105 496 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 ABCF2P2-201ENST00000450549 296 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AC092647.2-201ENST00000452998 253 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 RPL7P5-201ENST00000471472 736 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 COPS8P2-201ENST00000473228 627 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 KC877373.1-201ENST00000479066 408 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 RNU6-914P-201ENST00000516749 109 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 RNU6-143P-201ENST00000516942 93 ntBASIC3.61□□□□□ -1.83
CCDC28AQ8IWP9 RNA5SP290-201ENST00000517133 127 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms