Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 EEF1E1P1-201ENST00000446998 430 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 snoU13.28-201ENST00000459235 104 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AC108729.1-201ENST00000487812 947 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AL132857.1-201ENST00000555180 708 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 MIR4509-3-201ENST00000578671 94 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 MIR4509-2-201ENST00000583920 94 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AC245297.2-201ENST00000610119 565 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 MIR4509-1-201ENST00000618224 94 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 MIR8057-201ENST00000620957 69 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AC010608.3-201ENST00000625048 527 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AC011477.1-204ENST00000623416 1325 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 RNU6-198P-201ENST00000384258 104 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 MTCYBP38-201ENST00000417160 1123 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC009414.1-201ENST00000427200 443 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 RPS3AP12-201ENST00000443616 753 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC021382.1-201ENST00000483523 359 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC134050.1-201ENST00000495088 933 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 SCARNA15.2-201ENST00000516409 127 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 SNORA31.21-201ENST00000517180 77 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 CKS1BP7-201ENST00000522230 235 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 OR5BN1P-201ENST00000532955 829 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC124947.2-202ENST00000552735 133 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC009712.1-201ENST00000564938 316 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AMZ2P1-203ENST00000565833 850 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC010546.1-201ENST00000569391 485 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC009163.5-201ENST00000575421 637 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 RPL12P50-201ENST00000603116 116 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 RNU4-5P-201ENST00000607255 135 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC024560.3-201ENST00000608482 349 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AL442067.2-201ENST00000614033 363 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AC079597.1-201ENST00000624306 508 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.56□□□□□ -2
NUDCD3Q8IVD9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUDCD3Q8IVD9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 MIR208A-201ENST00000362287 71 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 RNU6-777P-201ENST00000364265 104 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 RNU6-637P-201ENST00000384050 107 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 RNU6-1242P-201ENST00000391052 103 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AL356421.1-201ENST00000403255 413 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 USP9YP33-201ENST00000412220 421 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC008850.1-201ENST00000427546 362 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 RPL7L1P10-201ENST00000427790 463 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AL590383.1-201ENST00000428602 75 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AL139132.1-201ENST00000431587 344 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AL512844.2-201ENST00000433990 593 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 USP9YP35-201ENST00000435696 412 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 SDAD1P2-201ENST00000441308 2028 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 MTND2P24-201ENST00000453434 806 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 RNU6-420P-201ENST00000458780 107 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 AC133134.1-201ENST00000466800 359 ntBASIC2.55□□□□□ -2
NUDCD3Q8IVD9 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.55□□□□□ -2
NUDCD3Q8IVD9 RPS27P26-201ENST00000494583 239 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms