Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USP43Q70EL4 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.46□□□□□ -1.86
USP43Q70EL4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.46□□□□□ -1.86
USP43Q70EL4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
USP43Q70EL4 FARSBP1-201ENST00000435808 1778 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
USP43Q70EL4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.45□□□□□ -1.86
USP43Q70EL4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP43Q70EL4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
USP43Q70EL4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.45□□□□□ -1.86
USP43Q70EL4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP43Q70EL4 OR4A15-201ENST00000314706 1035 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 Y_RNA.72-201ENST00000362894 103 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 Y_RNA.133-201ENST00000363428 110 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 Y_RNA.166-201ENST00000363730 102 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 RNU6-777P-201ENST00000364265 104 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 RNU6-769P-201ENST00000384407 104 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 RNU6-1160P-201ENST00000384546 104 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 SNORD115.1-201ENST00000391109 76 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 RN7SKP266-201ENST00000410232 287 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 CYCSP19-201ENST00000411715 316 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.45□□□□□ -1.86
USP43Q70EL4 SDCBPP2-201ENST00000424643 885 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AC018644.1-201ENST00000429934 551 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.45□□□□□ -1.86
USP43Q70EL4 AL358934.1-201ENST00000432346 324 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AC079448.1-201ENST00000449377 373 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 snoU13.22-201ENST00000459428 104 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AP002884.2-201ENST00000471647 395 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 ST13P14-201ENST00000474095 734 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.45□□□□□ -1.86
USP43Q70EL4 RPL30P11-201ENST00000495304 339 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.45□□□□□ -1.86
USP43Q70EL4 NPM1P41-201ENST00000512920 831 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.45□□□□□ -1.86
USP43Q70EL4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.45□□□□□ -1.86
USP43Q70EL4 AP003467.2-201ENST00000520175 319 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AP000790.1-201ENST00000528891 737 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AP003122.4-201ENST00000530980 758 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 ELOCP31-201ENST00000540463 467 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.45□□□□□ -1.86
USP43Q70EL4 AL512360.1-201ENST00000555346 234 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.45□□□□□ -1.86
USP43Q70EL4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.45□□□□□ -1.86
USP43Q70EL4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.45□□□□□ -1.86
USP43Q70EL4 BNIP3P23-201ENST00000599655 511 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.45□□□□□ -1.86
USP43Q70EL4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.45□□□□□ -1.86
USP43Q70EL4 RMST_3.1-201ENST00000611651 109 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 AL158801.5-201ENST00000623123 465 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.45□□□□□ -1.86
USP43Q70EL4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.45□□□□□ -1.86
USP43Q70EL4 SNORA50A-202ENST00000629536 136 ntBASIC3.45□□□□□ -1.86
USP43Q70EL4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.45□□□□□ -1.86
USP43Q70EL4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.45□□□□□ -1.86
USP43Q70EL4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
USP43Q70EL4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
USP43Q70EL4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
USP43Q70EL4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP43Q70EL4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP43Q70EL4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP43Q70EL4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP43Q70EL4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
USP43Q70EL4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
USP43Q70EL4 Y_RNA.67-201ENST00000362870 100 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 U8.3-201ENST00000363321 132 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP43Q70EL4 RNU6-657P-201ENST00000383904 107 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 RNU6-574P-201ENST00000384265 107 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 RNU6-809P-201ENST00000384461 107 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 RPS3AP36-201ENST00000398190 775 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 MIR1305-201ENST00000408300 86 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.44□□□□□ -1.86
USP43Q70EL4 BX295541.1-201ENST00000417774 250 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.44□□□□□ -1.86
USP43Q70EL4 NUP35P1-201ENST00000422734 947 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.44□□□□□ -1.86
USP43Q70EL4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.44□□□□□ -1.86
USP43Q70EL4 LSM1P1-201ENST00000438629 273 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.44□□□□□ -1.86
USP43Q70EL4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.44□□□□□ -1.86
USP43Q70EL4 SNRPGP6-201ENST00000451124 220 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AL590639.1-201ENST00000456484 337 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 VN1R105P-201ENST00000486595 910 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.44□□□□□ -1.86
USP43Q70EL4 UBE2CP3-201ENST00000502715 450 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 FTH1P24-201ENST00000503502 462 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC021146.2-201ENST00000504736 556 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.44□□□□□ -1.86
USP43Q70EL4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.44□□□□□ -1.86
USP43Q70EL4 RNU6-123P-201ENST00000516163 102 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 RNU6-150P-201ENST00000516237 95 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 RNU6-1046P-201ENST00000516538 107 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.44□□□□□ -1.86
USP43Q70EL4 IGHV3-76-201ENST00000522465 295 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.44□□□□□ -1.86
USP43Q70EL4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.44□□□□□ -1.86
USP43Q70EL4 AL512310.1-201ENST00000548639 172 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC090502.2-201ENST00000549267 280 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms